Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0500 ATGGCTGCAAAGGGACAGAAATTTGTGAGGTTTAAGGATTGGAAGTCACTTTCTTCTTCAAGCTTTGAACACAATGATTCTTCTAATGGTGGATTTCTCAAAAGAAAAGTTCAACCAAGCCTAAGTTCTGTCAGTGATGGATCAATAACAAATTTGTCTTGTCGGAACCATGTTCTTGATCCACAGGGGGCAACACTTCAGAAGTGGAACAAAATTTTTGTAATCACAAGTGTGATGGCAATCTCTGTGGACCCTCTTTTCTTTTACATCCCAATGATTGATGACAAGAAACAATGCCTTGCTTTAGATGGAACACTGAAGATTACTGCCAGTGTTCTCCGCACATTCTTTGATCTTTTCTACATTCTTCACATCATCTTTCAGTTTCGAACCGGGTTTATTGCACCTTCCTCTCGTGTGTTTGGAAGGGGTGAGCTAGTTAATGATCCTTGGGCCATCGTAATGAGATACTTAAGCTCTTACTTCATCATTGACATTCTATCAATTATTCCACTTCCTCAGTTGGTCATTTTAGCTATGATCCCATTCCCAAAATGCTCAGTTCCTTATGTGGGAAAGGATTTGTTGAAGTATACCATAATAGCACAGTACGTGCCAAGAATTCTGCGGATCTACCCGTTATTCAAAGAAGTAACAAGCACTTCTGGCATATTGACTGAGACAGCATGGGCTGGAGCTGCTTACAATCTTTTTCTCTATATGCTAGCAAGTCATGTTGTTGGAGCATTCTGGTATCTGTTTTCGGTAGAATCAAGGCTGCGGTGCTGGCGCAGGCGGTTGAAGAATACTACGTTCTTGCATGAATCCTACCTTAGCTGTGGAAGTGGCAATTCTACTGTTCAATCACTTCTCAAATCTTCTTGCCCGTTAACTGATCCACAACAAATTCAACACCTGGAAACTTTCAATTTTGGAATTTTTATAGAAGCTCTAAAGGCTCGCGTTGTAGAATCAAATACAGATTTTCCTCACAAGTTCTTCTACTGCTTTTGGTGGGGTTTGCGCAGTGTAAGTTCTGTTGGGCAAGGTCTCGAGACAAGTACTTATGCTGGGGAGATAATCTTTGCTATCTTCATTGCTGTCTTTGGATTGATTCTATTTGCATCACTTATTGGAAACATGCAGAAATATCTACAATCTACCACTGTCAGAGTTGAAGAGATGAGAATCAAAAGGAGGGATGCAGAACTGTGGATGTCCCACCGTATGCTACCTGATTTCCTGAAAGAAAGAATTAGACGTTATGAACAATACAAATGGCAAGAAAATAGGGGTGTTGAGGAGGAGACATTAATTCGCAACCTCCCTAAAGATCTCAGGAGGGACATAAAGCGTCATCTTTGCATAGACCTCCTTAAAAAAGTGCCAATGTTTGAGAACATGGATAATCAGTTGTTGGATGCACTGTGTGATAAACTGAAGCCAGTCCTTTACACGGAGAAAAGTTACATAGTTCGTGAAGGGGATCCAGTTGATGAAATGCTGTTCATAATGCGTGGAAAACTTGCTACTGCCACAACAAATGGTGGAAGAACTGGTTTCTTCAACTCCTTTGAGATCAAGGCTGGTGACTTCTGTGGAGAAGAGCTTCTAACATGGGCCTTGGACCCCAACTCCTCCTCAAATCTACCCATTTCAACTAGAACAGTAGAAACTATATCAGAAGTTGAAGCCTTTGCTCTCATGCCTGATGACTTGAAGTGTGTTGCTTCCCAATTTAGACGTCTTATAAACAGCAAACAACTTCAACACACTTTCAGGTTCTATTCCTTGCAATGGAAGACATGGGGTGCATGTTTCATACAAGCAGCTTGGCGCAGATACAAAAAAAAGAAGGCTGAGAGGTTGTTACGTGAAGCAGAAGAAAGGATACAAGCTTTGGAAAATGAGGAAGGGTCCTCACCTAGCTTTGCTGCTACAATATATGCATCAAGGTTTGCATCAAGTGGATTGCGCCACTTGCGAAGTGGTAAACGCACCAGAGTGCCACAGCCACAGAGATCCCTGATGCCTCAGAAGCCAGATGATTTCACTGCTCAGAAAAACTAG 2070 0.4174 MAAKGQKFVRFKDWKSLSSSSFEHNDSSNGGFLKRKVQPSLSSVSDGSITNLSCRNHVLDPQGATLQKWNKIFVITSVMAISVDPLFFYIPMIDDKKQCLALDGTLKITASVLRTFFDLFYILHIIFQFRTGFIAPSSRVFGRGELVNDPWAIVMRYLSSYFIIDILSIIPLPQLVILAMIPFPKCSVPYVGKDLLKYTIIAQYVPRILRIYPLFKEVTSTSGILTETAWAGAAYNLFLYMLASHVVGAFWYLFSVESRLRCWRRRLKNTTFLHESYLSCGSGNSTVQSLLKSSCPLTDPQQIQHLETFNFGIFIEALKARVVESNTDFPHKFFYCFWWGLRSVSSVGQGLETSTYAGEIIFAIFIAVFGLILFASLIGNMQKYLQSTTVRVEEMRIKRRDAELWMSHRMLPDFLKERIRRYEQYKWQENRGVEEETLIRNLPKDLRRDIKRHLCIDLLKKVPMFENMDNQLLDALCDKLKPVLYTEKSYIVREGDPVDEMLFIMRGKLATATTNGGRTGFFNSFEIKAGDFCGEELLTWALDPNSSSNLPISTRTVETISEVEAFALMPDDLKCVASQFRRLINSKQLQHTFRFYSLQWKTWGACFIQAAWRRYKKKKAERLLREAEERIQALENEEGSSPSFAATIYASRFASSGLRHLRSGKRTRVPQPQRSLMPQKPDDFTAQKN* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0500 689 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 7 687 - -
Gso7g0500 689 SUPERFAMILY cAMP-binding domain-like 393 580 IPR018490 -
Gso7g0500 689 Gene3D - 72 388 - -
Gso7g0500 689 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 7 687 - -
Gso7g0500 689 Coils Coil 617 637 - -
Gso7g0500 689 Gene3D Jelly Rolls 462 582 IPR014710 -
Gso7g0500 689 Gene3D Helix hairpin bin 391 455 - -
Gso7g0500 689 PRINTS EAG/ELK/ERG potassium channel family signature 125 134 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gso7g0500 689 PRINTS EAG/ELK/ERG potassium channel family signature 242 252 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gso7g0500 689 PRINTS EAG/ELK/ERG potassium channel family signature 333 350 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gso7g0500 689 PRINTS EAG/ELK/ERG potassium channel family signature 359 370 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gso7g0500 689 PRINTS EAG/ELK/ERG potassium channel family signature 377 386 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gso7g0500 689 PRINTS EAG/ELK/ERG potassium channel family signature 427 434 IPR003938 GO:0005249|GO:0006813|GO:0016020
Gso7g0500 689 CDD CAP_ED 464 596 IPR000595 -
Gso7g0500 689 MobiDBLite consensus disorder prediction 668 689 - -
Gso7g0500 689 MobiDBLite consensus disorder prediction 661 689 - -
Gso7g0500 689 SUPERFAMILY Voltage-gated potassium channels 60 386 - -
Gso7g0500 689 Pfam Ion transport protein 69 392 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gso7g0500 689 SMART cnmp_10 464 595 IPR000595 -
Gso7g0500 689 ProSiteProfiles cAMP/cGMP binding motif profile. 464 548 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0500 Gso-Chr7 5029888 5035970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0500 1 682 Ion Channels AT4G01010 60.340 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0500 K05391 - gmx:100795201 1364.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0500 7 5029888 5035970 Gso7g0500 7 5029888 5035970 ECH
Gso7g0500 7 5029888 5035970 Gso16g0207 16 2401987 2407124 GST