Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0497 ATGATAGTGAAGCGGACGATGAAAACCGAAACGCCGAACCTGAAACGATGTAAGATTGAGGATTCCGAGAATGCGATTCAGAAGAAGCGTAGGGTGACCGGTTTTTACTCGCTGGGAGTGCCAGGGGAGGCTGAATATTTCAGCAGTTGTTCTGGCTCATGGAGCAGCGAAGGGTCGTATTGGGGTGGTGGCGGTGGTGGTGGTGAGGTTCAGTCCAATTCGAATTCCGTTCTGTTTAATCGGAAAACGGCGAAGGAGGCGTGTCTGCCGCCATTACTGCGGTCCTCGCGTGGCCGCGCTCAGAAGCTTCCGTCGAGGTTCAATGACTCGGTCCTTGACGCCGCGGATGGAGACTTGAGCTTTGAAGATAATGATAAGAGTTTTGTGGAGGATGGAAAGGGTGGTATTGGTGTGAAAGAGGAGAAGAGTGATAGTGTGTGTTATTCGTCGAGTGTGGGTAAAAGGACTGTTGTTAAGGCCGAGAGTAATACTTCTGGGATTAGTTTTGAGGGTGTGGACCAAAAGCCCGTTGGTGAGAAGAGGAGAGAGGTTTACAAGCCAGAGGATTTTGCTTTGGGAGATATCGTTTGGGCTAAGTGTGGGAAGAGGTACCCGGCTTGGCCTGCTGTGGTGATTGATCCTGTCTTGGAGGCTCCAGAGTCTGTGCTCAGCTGTTGTGTTCCGGGCGCGCTTTGTGTGATGTTTTTCGGTTATTCAAAGAATGGAACTCAAAGGGACTACGCTTGGGTGAAGCAGGGAACGGTCTTCCCCTTCTCGGAGTTCATGGACAGGTTTCAGGGACAGACCCGGTTGTACAAGAGCAAACCGAGTGACTTCCGCATGGCACTGGAGGAGGCAATGCTGGCAGAAGATGGTGTTCTGGAATCACATTTGGGAAGAGAAGAATTAACTGGTGTAGATGCTCATCCTGATGGACTTATGGAGGCCACTGTTTCTTATGTTGATGGGGAATGCTACGGCCAGGATCAGGATACAAGGTGTTGTGCTGGCTGTGGTCTGATGTTTCCATGCAAAACCATGAAGAAAATTAAGGATTCAAATGGTGCACCCCAATTTTGTTGCAAATATTGTTCTAAGTTACGAAAATCAAAACAATATTGTGGCATTTGCAAAAGGATTTGGCATCACTCAGATGGTGGAAATTGGGTGTGTTGTGATGGTTGTAATGTGTGGGTGCATGCTGAGTGCGATAAAATATCCAGCAAAGTTTTCAAGGATCTGGAAAATACAGATTACTATTGTCCAGATTGCAAGGGAAAATTCAATTGTAAATTACCAGCATCACAAACATACAAGTCAAATATCGAATTAATAGAGAATAGCCAAAAATCTATGATACCCGAGAAAGTATTGGTGGTGTGCAATGGCATGGAAGGCTTTTACATCCCAAAGCTTCATCTGGTCATGTGCAAGTGTGGCTCTTGTGGTTCAAGAAAGCAGACACTTAGTGAATGGGAAAAACATACAGGTTGCAGATCGAAAAAATGGAAACATAGTGTGAAAGTGAAGAGTACAATGCTACCACTGGAAAAATGGATGGAAGAAAACATTCCACTTGATGGAATACCTGAGCAGTTAGATCAACAGCAGGTGCTGGCCTTTTTGCAAGAGAAGTATGAGCCTGTTAATGTAAAATGGACAACAGAAAGATGTGCTGTTTGCAGATGGGTTGAAGATTGGGAAGATAACAAAATTATTATTTGTAACAGATGCCAAATAGCAGTCCACCAAGAATGCTATGGGGCAAAGAATGTTCAGGATTTTACTTCTTGGGTTTGTAGAGTATGTGAAACTCCTGATGTTGAGAGAGAGTGTTGCCTCTGCCCAGTAAAAGGTGGTGCTCTAAAGCCAACGGATGTTGAAATGTTGTGGGTTCATGTAACATGTGCTTGGTTTCGACCTCAAGTTGTTTTCCAAAACCATGAGGCCATGGAACCTGCCATGGGAATCCTTAAAATTCCTCCTAATTCCTTTGTGAAGACTTGTGTGATCTGTAAACAGAGCCATGGTTCCTGCATAAGTTGTTGCAAGTGTTCTACTTATTTTCATGTGATGTGTGCATCAAGGGCAGGATATACAATGGAGTTACATTCCATGGAGAAGAATGGGACTCAAGTAACAAGGAAGCTAATATATTGTGCAATTCACAGGGTTCCAAATCCAGATTCTGTACTGGTGGTACACACACCCCTGGGGATTTTCTCTCCCAGAACTTCACTTCAAAATCAGAAGGGATGCTTCAGGGGATCAAGGCTAATTTTATCAAAGAATATAGAGCTTAATGAATCTTCAACCACTGAAAATGACTTAGTAGAGCCGCTGTCTGCGGCCAGGTGTCGTGTGTACCGAAGGTCTCCTAATAAGAGAGCTGATGTGCCAATAATTCACTTGCTGGGGGGACCCAGCCTTCATTCTTTAGGTGCAATAACTCAGTTGAACATTTTTAAGGATGCTGATGAATCTAAAGTATTCACTTCTTTCAAGGAACGTCTTCACCATTTATGGGAAACGGAAAAATTTAGAGTTTGCTTTGGAAAATCGGGCATTCATGGATGGGGTCTCTTTGCTCGTAGAGATATACAAGAAGGAGAGATGGTTGTTGAGTATCGTGGTGTGCACGTAAGGCGTAGTGTTGCTGACCTGAGGGAAGAAAAATACCGTTCAGAAGGCAAGGATTGCTATCTGTTCAAGATCAGTGAGGAAGTGGTAGTTGATGCAACGAACAGAGGCAATATAGCACGTTTAATAAACCATTCTTGCATGCCAAACTGCTATGCAAGGATTATGAGTCTGGGTGATCAGGGGAGCCGAATTGTTCTTATTGCCAAGACCAATGTTTCTGCTGGTGAAGAACTAACGTATGATTACTTGTTTGATCCAGATGAGCGGGATGAATTGAAAGTTCCTTGCCTTTGCAAAGCCCCTAATTGTAGGAGATTTATGAATTAG 2970 0.4428 MIVKRTMKTETPNLKRCKIEDSENAIQKKRRVTGFYSLGVPGEAEYFSSCSGSWSSEGSYWGGGGGGGEVQSNSNSVLFNRKTAKEACLPPLLRSSRGRAQKLPSRFNDSVLDAADGDLSFEDNDKSFVEDGKGGIGVKEEKSDSVCYSSSVGKRTVVKAESNTSGISFEGVDQKPVGEKRREVYKPEDFALGDIVWAKCGKRYPAWPAVVIDPVLEAPESVLSCCVPGALCVMFFGYSKNGTQRDYAWVKQGTVFPFSEFMDRFQGQTRLYKSKPSDFRMALEEAMLAEDGVLESHLGREELTGVDAHPDGLMEATVSYVDGECYGQDQDTRCCAGCGLMFPCKTMKKIKDSNGAPQFCCKYCSKLRKSKQYCGICKRIWHHSDGGNWVCCDGCNVWVHAECDKISSKVFKDLENTDYYCPDCKGKFNCKLPASQTYKSNIELIENSQKSMIPEKVLVVCNGMEGFYIPKLHLVMCKCGSCGSRKQTLSEWEKHTGCRSKKWKHSVKVKSTMLPLEKWMEENIPLDGIPEQLDQQQVLAFLQEKYEPVNVKWTTERCAVCRWVEDWEDNKIIICNRCQIAVHQECYGAKNVQDFTSWVCRVCETPDVERECCLCPVKGGALKPTDVEMLWVHVTCAWFRPQVVFQNHEAMEPAMGILKIPPNSFVKTCVICKQSHGSCISCCKCSTYFHVMCASRAGYTMELHSMEKNGTQVTRKLIYCAIHRVPNPDSVLVVHTPLGIFSPRTSLQNQKGCFRGSRLILSKNIELNESSTTENDLVEPLSAARCRVYRRSPNKRADVPIIHLLGGPSLHSLGAITQLNIFKDADESKVFTSFKERLHHLWETEKFRVCFGKSGIHGWGLFARRDIQEGEMVVEYRGVHVRRSVADLREEKYRSEGKDCYLFKISEEVVVDATNRGNIARLINHSCMPNCYARIMSLGDQGSRIVLIAKTNVSAGEELTYDYLFDPDERDELKVPCLCKAPNCRRFMN* 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0497 989 PANTHER PHD FINGER PROTEINS 1 989 - -
Gso7g0497 989 SMART PostSET_3 973 989 IPR003616 -
Gso7g0497 989 ProSiteProfiles Zinc finger PHD-type profile. 555 606 IPR019787 -
Gso7g0497 989 ProSiteProfiles PWWP domain profile. 192 261 IPR000313 -
Gso7g0497 989 Pfam PHD-finger 373 426 IPR019787 -
Gso7g0497 989 CDD PHD_TCF19_like 374 424 - -
Gso7g0497 989 ProSiteProfiles SET domain profile. 847 964 IPR001214 GO:0005515
Gso7g0497 989 ProSiteProfiles Zinc finger PHD-type profile. 371 427 IPR019787 -
Gso7g0497 989 SMART PWWP_4 190 259 IPR000313 -
Gso7g0497 989 CDD SET_SETD1-like 836 985 - -
Gso7g0497 989 ProSiteProfiles Post-SET domain profile. 973 989 IPR003616 -
Gso7g0497 989 Gene3D - 180 295 - -
Gso7g0497 989 SUPERFAMILY Tudor/PWWP/MBT 183 295 - -
Gso7g0497 989 ProSiteProfiles Extended PHD (ePHD) domain profile. 609 724 IPR034732 -
Gso7g0497 989 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 607 725 IPR013083 -
Gso7g0497 989 Pfam PHD-zinc-finger like domain 611 723 - -
Gso7g0497 989 SUPERFAMILY SET domain 844 985 IPR046341 -
Gso7g0497 989 SMART set_7 847 970 IPR001214 GO:0005515
Gso7g0497 989 Pfam SET domain 858 963 IPR001214 GO:0005515
Gso7g0497 989 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 1 989 - -
Gso7g0497 989 SUPERFAMILY FYVE/PHD zinc finger 371 432 IPR011011 -
Gso7g0497 989 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 365 429 IPR013083 -
Gso7g0497 989 Pfam PHD-finger 570 604 - -
Gso7g0497 989 SUPERFAMILY FYVE/PHD zinc finger 555 620 IPR011011 -
Gso7g0497 989 ProSitePatterns Zinc finger PHD-type signature. 558 603 IPR019786 -
Gso7g0497 989 SMART PHD_3 557 604 IPR001965 -
Gso7g0497 989 SMART PHD_3 373 425 IPR001965 -
Gso7g0497 989 SMART PHD_3 668 724 IPR001965 -
Gso7g0497 989 Gene3D SET domain 829 989 IPR046341 -
Gso7g0497 989 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 989 IPR025780 -
Gso7g0497 989 CDD PHD_ATX3_4_5_like 557 603 IPR042011 -
Gso7g0497 989 Pfam PWWP domain 193 289 IPR000313 -
Gso7g0497 989 Gene3D - 449 536 IPR010919 -
Gso7g0497 989 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 553 606 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0497 Gso-Chr7 5005231 5013570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0497 323 398 EF-hand Containing Proteins AT5G28340 57.895 2.20e-21 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Gso7g0497 zf-HC5HC2H_2 4e-29 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0497 - - gmx:100793624 2018.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0497 7 5005231 5013570 Gso7g0497 7 5005231 5013570 ECH
Gso7g0497 7 5005231 5013570 Gso16g0204 16 2383826 2391723 GST