Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0487 ATGGCTCATCTGGAGTGTAATCTTGGGGGCCCTGGGAGTAGTGGAACTTCTCAACCGGAAAAAGGTTTGAAGGATGATGATCTGTATAGAGAGCTGTGGAAGCTATGTGCAGGGCCATTGGTGGATGTTCCTCGTAATGGGGACAGAGTTTTCTACTTCCCTCAAGGTCACATGGAACAATTGCAAGCATCTACGGATCAGGAATTGAACCAGGAAATTCCCCATTTCAATCTCCCGGCCAAGATTTTTTGCCGTGTTGTGAACATTCAGCTGTTGGCGGAACAAGACACTGATGAGGTTTATGCTTGCATCGCTTTACTTCCAGAATCAGATCAAACTGAGCCTACAAACCCTGATCCAAATGTTTCTGAGGCCCCAAAACAGAAGTTTCACTCATTTTGCAAGATATTAACTGCCTCTGATACTAGCACACATGGAGGATTTTCAGTTTTGCGGAAGCATGCTACTGAGTGCCTGCCTGAATTGGACATGACTCAATCAACCCCTACTCAGGAGTTGGCAGCAAAGGATCTTCATGGATTTGAGTGGAAGTTTAAGCATATATATAGGGGTCAACCAAGGAGGCATTTGCTTACAACTGGTTGGAGTACTTTCGTTGCATCTAAAAGATTGGTTGCTGGAGATGCTTTTGTGTTTCTAAGGGGAGAGCATGGACAATTGAGAGTTGGTGTCAGACGTTTAGCGCGGCAGCAGAGTCCTATGCCTTCATCTGTGATATCAAGCCAGAGCATGCATCTCGGCGTGCTTGCCACTGCTTCCCATGCTGTCATGACTCGTACAATGTTTTTGGTTTATTATAAGCCAAGGACTAGCCAGTTTATTGTTGGTTTGAACAAATATCTGGAGGCAGTCAACAATAAATTTTCACTCAGCATGCGATTCAAGATGCGATTCGAGGGAGATGACTCACCTGAGAGAAGATTTTCCGGTACTATTGTTGGGGTTGGAGACGTGTCTGCAGGGTGGTCAAATTCTCAGTGGCGCTCATTGAAGGTTCAATGGGATGAACCAGCAACAATTCCAAGGCCAGATAGAGTTTCTTGTTGGGAGATAGAGCCTTTTGTAGCTTCTACTGCTTTGAATGTCACACAACCAGCAGTTAAGGGTAAAAGGTCTAGGCCTGCTGATGTTTTATCTTCTGGTTTCTGGTATCATGGTTCTTCCAATGAGCTTAGTCAATTAGGTGCTGCTGCTGAGGTCCAAAGCAAGGAAAATCAGGTTGTTCCATGCTCTCTGAGGCAGAAAGACATTATTAATAGCAATCCTATTAATGCTAATAACTCTAGCATCAGTACTAGAGTCCGAATGGAAGGAGTATGGCCTTCTTCACCACATTTGAATGCCACTCCAAACCTTTTTTCTGATCCCAATAACAACAACAGCAACAACGGCGTTTCGGCACGATCACTGATCTCTGGTTATCCTAATGTTCCATCTAGATCAAGTGATGGTCCCACATGCGACGGTGTGGAAGATGGGAAAAAGACTGAGAACTCCCTTGATTGCTGGTTATTTGGAGTTAATTTGACTAACAATTGTAGCAACGTTATTACTACTCCTTCAGAGAGGGAACAGAGAGGTCCAAGCTCAAGTGTTGTTCTTAGTGGTCCCAAAGAATCTATTCCTGCAGCTGCATGTGAAACTGAGAGGGTTCAGACTCCCAACTATTCACTGTCCAACAAAGGGCAGAAGCAAATTATTTCTGAGGCATCACCAAATCAGTGGCAGAACAAGCAGGCCACTGTACTATCCATGAGGACGCGGACTAAGGTGCAAATGCAAGGTGTTGCTGTTGGTCGTGCGTTTGACTTGACCACGTTGAGTGGCTATGATGATCTCATAGATGAACTTGAGAAATTGTTTGAGATCAGAGGAGAGCTGCGTTCACAAGACAAATGGGCTGTTACTTTCACAGATGATGAAAATGATATGATGCTCGCGGGTGATGATCCATGGCCGGAGTTCTGCAACATGGTGAAGAGGATTTTCATTTGTTCAAGGGAGGACTTGAAGAAGATGAAATGCTGCAAGTTACCTGCTTCTTCATCAGAGGTTGAAGAGATTCTATTGAGTCCAGATTCACAGAATAGGGATGAGACTCAGCAGTCTCACATGCCTTAG 2142 0.4463 MAHLECNLGGPGSSGTSQPEKGLKDDDLYRELWKLCAGPLVDVPRNGDRVFYFPQGHMEQLQASTDQELNQEIPHFNLPAKIFCRVVNIQLLAEQDTDEVYACIALLPESDQTEPTNPDPNVSEAPKQKFHSFCKILTASDTSTHGGFSVLRKHATECLPELDMTQSTPTQELAAKDLHGFEWKFKHIYRGQPRRHLLTTGWSTFVASKRLVAGDAFVFLRGEHGQLRVGVRRLARQQSPMPSSVISSQSMHLGVLATASHAVMTRTMFLVYYKPRTSQFIVGLNKYLEAVNNKFSLSMRFKMRFEGDDSPERRFSGTIVGVGDVSAGWSNSQWRSLKVQWDEPATIPRPDRVSCWEIEPFVASTALNVTQPAVKGKRSRPADVLSSGFWYHGSSNELSQLGAAAEVQSKENQVVPCSLRQKDIINSNPINANNSSISTRVRMEGVWPSSPHLNATPNLFSDPNNNNSNNGVSARSLISGYPNVPSRSSDGPTCDGVEDGKKTENSLDCWLFGVNLTNNCSNVITTPSEREQRGPSSSVVLSGPKESIPAAACETERVQTPNYSLSNKGQKQIISEASPNQWQNKQATVLSMRTRTKVQMQGVAVGRAFDLTTLSGYDDLIDELEKLFEIRGELRSQDKWAVTFTDDENDMMLAGDDPWPEFCNMVKRIFICSREDLKKMKCCKLPASSSEVEEILLSPDSQNRDETQQSHMP* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0487 713 SUPERFAMILY CAD & PB1 domains 587 669 - -
Gso7g0487 713 SMART B3_2 133 235 IPR003340 GO:0003677
Gso7g0487 713 CDD B3_DNA 131 233 IPR003340 GO:0003677
Gso7g0487 713 Pfam B3 DNA binding domain 133 233 IPR003340 GO:0003677
Gso7g0487 713 Gene3D - 130 234 IPR015300 -
Gso7g0487 713 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 14 690 IPR044835 GO:0003677|GO:0006355|GO:0009725
Gso7g0487 713 MobiDBLite consensus disorder prediction 1 23 - -
Gso7g0487 713 MobiDBLite consensus disorder prediction 688 713 - -
Gso7g0487 713 ProSiteProfiles B3 DNA-binding domain profile. 133 235 IPR003340 GO:0003677
Gso7g0487 713 MobiDBLite consensus disorder prediction 694 713 - -
Gso7g0487 713 PANTHER AUXIN RESPONSE FACTOR 11 14 690 - -
Gso7g0487 713 Gene3D - 589 681 - -
Gso7g0487 713 Pfam AUX/IAA family 586 629 IPR033389 -
Gso7g0487 713 ProSiteProfiles PB1 domain profile. 593 674 IPR000270 GO:0005515
Gso7g0487 713 Gene3D - 294 366 - -
Gso7g0487 713 SUPERFAMILY DNA-binding pseudobarrel domain 123 262 IPR015300 -
Gso7g0487 713 Pfam Auxin response factor 259 338 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0487 Gso-Chr7 4858110 4863318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0487 22 685 B3 DNA Binding Superfamily AT2G46530 53.003 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Gso7g0487 B3 7.9e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0487 K14486 - gmx:100790981 1421.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0487 7 4858110 4863318 Gso7g0487 7 4858110 4863318 ECH