Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso7g0473 | ATGAAGGTTCCAATGGAGGAAAAACCATTCCCTGCATGGTCCTGGTCTATTGAACAGTGTTTGAAAGAGTATGGTGTGAAACTGGACAAGGGTCTGAGTACCTATGAGGTTCAGAAGCGGCACGAGAAGTATGGTATGAATGAGCTAGCAAAGGAGAAGGGAAAACCCTTGTGGGAACTTGTGTTGGAACAATTTGATGACATGCTGGTGAAGATACTTTTGGCTGCAGCCTTCATATCATTTCTCTTGGCTTACTTTCACGGAAGTGACTCAGGGGAGTCTGGATTCGAGGCATATGTGGAGCCGCTAGTGATAATTCTAATTTTGGTCCTTAATGCCATTGTTGGGGTTTGGCAAGAGAACAATGCAGAGAAGGCTCTTGAAGCTCTCAAAGAGTTGCAAAGTGAGTCTGGAAAAGTGTTAAGGGACGGCTATTTTGTGCCTGATTTGCCTGCAAAAGAGCTTGTTCCTGGTGATATTGTGGAGCTGCATGTTGGAGATAAGGTACCGGCTGACATGAGAGTTGCGGCTTTGAAAACCTCCACGTTGAGGGTTGAGCAAAGTTCTTTAACCGGAGAAGCAATGCCGGTTCTCAAGGGGACAAATCCTGTTTTCTTGGATGACTGTGAGTTGCAGGCTAAAGAGAACATGGTGTTTGCAGGCACCACTGTTGTCAATGGGAGTTGTGTTTGCATTGTTATCACCACAGGAATGGACACTGAAATTGGAAAGATACATAAGCAGATACACGAGGCTTCTCAGGAGGAGAGTGACACCCCTTTGAGGAAGAAGCTGGATGAGTTTGGTAACAGGCTTACCACTGCAATTGGGTTAGTTTGTCTCATTGTTTGGGTTATTAACTACAAGAATTTCATTTCTTGGGAAGTTGTGGATGGATGGCCCTCAAACATCAATTTTTCATTCCAAAAGTGTACCTACTATTTCAAAATTGCTGTCTCCCTTGCTGTTGCTGCAATTCCTGAAGGCCTTCCTGCTGTTATCACAACCTGTTTAGCACTCGGAACGCGGAAAATGGCTCAAAAGAATGCAATTGTGAGAAAGCTGCCAAGTGTGGAAACTTTGGGATGTACCACTGTTATATGTTCAGACAAAACTGGTACTTTGACAACAAATCAGATGGCTGTGACAGAGTTCTTTACTTTGGGAGGGAAAACCACTGCTTCTAGACTCATTAGTGTTGAAGGCACAACTTATGATCCCAAGGATGGGGGAATTCTTGATTGGGGGTGCTATAACATGGATGCTAATTTGCAAGTCATGGCTGAAATATGTGCTTTATGTAATGATGCTGGGATTTACTTCGATGGTCGCCTTTTTAGAGCCACTGGTTTGCCTACTGAAGCTGCTCTCAAAGTTTTGGTTGAAAAAATGGGAGTTCCAGATGCAAAGGCAAGGAACAAAATTCGCAATAATACAGAACTTGCTGCAAACAACATGATGAATGGCAACACTATGGTGAAGTTAGGATGCTGTGAGTGGTGGAATAAAAGATCCAAAAAGGTAGCTACATTGGAGTTTGATCGAATTCGGAAGTCAATGAGTGTCATTGTTCGTGAACCAAATGGTCAAAATCGGCTTCTTGTCAAGGGTGCTGTTGAGAGTTTACTGGAGCGTAGTTCACATGTGCAACTTGCTGATGGATCCTTGGTTCCAATAGATGATCAATGTAGGGAACTACTTCTTCGAAGGCTCCAGGAGATGAGTTCAAAGGGATTGCGTTGCTTGGGTTTCGCTTATAACGATGAATTAGGAGAATTTTCAGACTACTATGCTGACACTCACCCTGCTCACAAGAAATTGCTTGATCCAACATACTACTCATCCATTGAAAGTGATCTAGTTTTTGTTGGCATTGTTGGTTTAAGAGACCCTCCTCGTGAGGAAGTTCACAAAGCAATTGAGGATTGTAAGGAAGCTGGCATTAGAGTTATGGTAATAACTGGAGATAATAAGTCAACAGCAGAGGCTATTTGTAGGGAGATTAAATTGTTCTCTAAAGATGAGGATCTCACAGGGCAAAGTTTGGCTGGTAAGGAATTCATCTCTCTTTCTCATTCAGAACAAGTTAAAATATTGTTGAGGCCTGGAGGCAAGGTTTTCTCTCGAGCTGAGCCTAGACACAAGCAAGAAATTGTTAGACTACTGAAGGAAATGGGGGAGATTGTAGCAATGACTGGAGATGGTGTGAATGATGCACCTGCACTTAAGCTAGCCGACATAGGGATTGCTATGGGCATAACTGGGACAGAGGTTGCAAAAGAAGCTTCAGACATGGTGCTTGCAGATGACAATTTTAGTACCATAGTTTTAGCTGTTGCTGAGGGTCGCTCTATTTATAATAACATGAAATCATTTATCAGGTACATGATATCATCCAATATTGGGGAAGTAATATCCATATTCTTGACTGCTGCTCTAGGGATCCCAGAATGCATGATATCAGTGCAACTTCTGTGGGTGAATTTGGTTACTGATGGTCCACCTGCTACAGCTCTTGGTTTTAACCCTGCCGATGTTGATATAATGCAGAAGCCACCTCGCAGAAGTGATGATCCTCTAATAAGTTCTTGGGTTCTTTTCCGTTATCTGGTAATTGGTTCCTATGTGGGACTAGCAACAGTTGGCATTTTTGTCTTGTGGTACACTCAAGCATCTTTTCTTGGCATCAATCTTGTGAGTGATGGTCACACAATCATAGAATTGTCCCAGCTTCGTAACTGGGGGGAGTGTCCCTCATGGTCTAATTTCACTGTTGCTCCATTTGAGGTTGCTGGGGGCCGATTGATCACATTTTCAAATCCTTGTGACTATTTCTCAGTTGGCAAACTAAAGGCCATGACTCTGTCTCTCTCAGTCTTGGTGGCAATTGAGATGTTTAACTCTTTGAATGCCCTCTCAGAAGAGAATAGCTTGAGGAAACTACCACCTTGGAGGAACCCTTGGCTTTTGGTGGCCATGTCAATATCATTTGGACTCCATTGCCTCATACTCTATACCCCATTCCTTGCAGAAGTCTTTGGTGTTATTCCACTTAGTTTGAATGAGTGGTTTATGGTACTTTTGATATCAGCACCTGTTATTCTTATTGATGAGATTCTAAAGTTAGTGGTGAGGAGTCAAAGAAGGTTGTTGACTAAGGAGAAAGAAGCATGA | 3174 | 0.4282 | MKVPMEEKPFPAWSWSIEQCLKEYGVKLDKGLSTYEVQKRHEKYGMNELAKEKGKPLWELVLEQFDDMLVKILLAAAFISFLLAYFHGSDSGESGFEAYVEPLVIILILVLNAIVGVWQENNAEKALEALKELQSESGKVLRDGYFVPDLPAKELVPGDIVELHVGDKVPADMRVAALKTSTLRVEQSSLTGEAMPVLKGTNPVFLDDCELQAKENMVFAGTTVVNGSCVCIVITTGMDTEIGKIHKQIHEASQEESDTPLRKKLDEFGNRLTTAIGLVCLIVWVINYKNFISWEVVDGWPSNINFSFQKCTYYFKIAVSLAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMAVTEFFTLGGKTTASRLISVEGTTYDPKDGGILDWGCYNMDANLQVMAEICALCNDAGIYFDGRLFRATGLPTEAALKVLVEKMGVPDAKARNKIRNNTELAANNMMNGNTMVKLGCCEWWNKRSKKVATLEFDRIRKSMSVIVREPNGQNRLLVKGAVESLLERSSHVQLADGSLVPIDDQCRELLLRRLQEMSSKGLRCLGFAYNDELGEFSDYYADTHPAHKKLLDPTYYSSIESDLVFVGIVGLRDPPREEVHKAIEDCKEAGIRVMVITGDNKSTAEAICREIKLFSKDEDLTGQSLAGKEFISLSHSEQVKILLRPGGKVFSRAEPRHKQEIVRLLKEMGEIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVLAVAEGRSIYNNMKSFIRYMISSNIGEVISIFLTAALGIPECMISVQLLWVNLVTDGPPATALGFNPADVDIMQKPPRRSDDPLISSWVLFRYLVIGSYVGLATVGIFVLWYTQASFLGINLVSDGHTIIELSQLRNWGECPSWSNFTVAPFEVAGGRLITFSNPCDYFSVGKLKAMTLSLSVLVAIEMFNSLNALSEENSLRKLPPWRNPWLLVAMSISFGLHCLILYTPFLAEVFGVIPLSLNEWFMVLLISAPVILIDEILKLVVRSQRRLLTKEKEA* | 1058 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso7g0473 | 1057 | Gene3D | - | 63 | 1045 | - | - | |
Gso7g0473 | 1057 | PRINTS | P-type cation-transporting ATPase superfamily signature | 186 | 200 | - | - | |
Gso7g0473 | 1057 | PRINTS | P-type cation-transporting ATPase superfamily signature | 368 | 382 | - | - | |
Gso7g0473 | 1057 | PRINTS | P-type cation-transporting ATPase superfamily signature | 624 | 635 | - | - | |
Gso7g0473 | 1057 | PRINTS | P-type cation-transporting ATPase superfamily signature | 646 | 656 | - | - | |
Gso7g0473 | 1057 | PRINTS | P-type cation-transporting ATPase superfamily signature | 732 | 751 | - | - | |
Gso7g0473 | 1057 | PRINTS | P-type cation-transporting ATPase superfamily signature | 756 | 768 | - | - | |
Gso7g0473 | 1057 | PANTHER | RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED | 7 | 1052 | - | - | |
Gso7g0473 | 1057 | SUPERFAMILY | Calcium ATPase, transduction domain A | 139 | 248 | IPR008250 | - | |
Gso7g0473 | 1057 | PRINTS | Sodium/potassium-transporting ATPase signature | 361 | 382 | - | - | |
Gso7g0473 | 1057 | PRINTS | Sodium/potassium-transporting ATPase signature | 985 | 1009 | - | - | |
Gso7g0473 | 1057 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 7 | 1052 | - | - | |
Gso7g0473 | 1057 | SFLD | Haloacid Dehalogenase | 349 | 784 | - | - | |
Gso7g0473 | 1057 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 11 | 1047 | IPR023298 | - | |
Gso7g0473 | 1057 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 370 | 376 | IPR018303 | - | |
Gso7g0473 | 1057 | SMART | Cation_ATPase_N_a_2 | 11 | 85 | IPR004014 | - | |
Gso7g0473 | 1057 | SFLD | p-type atpase | 349 | 784 | IPR044492 | - | |
Gso7g0473 | 1057 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 375 | 628 | IPR023299 | GO:0000166 | |
Gso7g0473 | 1057 | Gene3D | - | 378 | 631 | IPR023299 | GO:0000166 | |
Gso7g0473 | 1057 | Pfam | Cation transporting ATPase, C-terminus | 817 | 1043 | IPR006068 | - | |
Gso7g0473 | 1057 | Pfam | haloacid dehalogenase-like hydrolase | 365 | 746 | - | - | |
Gso7g0473 | 1057 | Pfam | Cation transporter/ATPase, N-terminus | 13 | 80 | IPR004014 | - | |
Gso7g0473 | 1057 | Gene3D | - | 365 | 777 | IPR023214 | - | |
Gso7g0473 | 1057 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 104 | 295 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Gso7g0473 | 1057 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 705 | 814 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Gso7g0473 | 1057 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 306 | 393 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Gso7g0473 | 1057 | Pfam | E1-E2 ATPase | 133 | 348 | - | - | |
Gso7g0473 | 1057 | Gene3D | - | 30 | 252 | - | - | |
Gso7g0473 | 1057 | CDD | P-type_ATPase_SERCA | 13 | 1045 | - | - | |
Gso7g0473 | 1057 | SUPERFAMILY | HAD-like | 366 | 836 | IPR036412 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso7g0473 | Gso-Chr7 | 4701709 | 4708048 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso7g0473 | 6 | 1054 | Primary Pumps ATPases(2) | AT4G00900 | 77.683 | 0.0 | 1696 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso7g0473 | K01537 | - | gmx:100800498 | 2073.13 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso7g0473 | 7 | 4701709 | 4708048 | Gso7g0473 | 7 | 4701709 | 4708048 | ECH | |
Gso7g0473 | 7 | 4701709 | 4708048 | Gso16g0180 | 16 | 2063991 | 2070268 | GST |