Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0463 ATGGGTATAGGGGAGAAGAGTTCGAGCAAGAGTTTCAATCTGCACCATCGTGAAGTGAAGAATAAGCAGCAAGAGTTCAGAGGGGTCCCAAAAGGGTGCATGGCAATCAAGGTTGGTCAAGGGGAAGAGCAACAAAGGTTCGTGGTGCCTGTGATTTACATCAACCACCCTCTCTTCATGCAGCTTCTGAAAGAGGCAGAGGAAGAGTATGGCTTTGACCAAAAGGGCACCATCACCATCCCTTGCCATGTTGAGGAATTCAGAAACGTTCGTGGCTTGATTGATAGGGACAAGTCCCTTCATCACCACCACCACCACCACCACCATGTTGGGTGCTTTGGCTTCTGA 348 0.4943 MGIGEKSSSKSFNLHHREVKNKQQEFRGVPKGCMAIKVGQGEEQQRFVVPVIYINHPLFMQLLKEAEEEYGFDQKGTITIPCHVEEFRNVRGLIDRDKSLHHHHHHHHHVGCFGF* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0463 115 PANTHER SMALL AUXIN-UP RNA-RELATED 21 111 - -
Gso7g0463 115 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 21 111 IPR003676 GO:0009733
Gso7g0463 115 Pfam Auxin responsive protein 21 90 IPR003676 GO:0009733
Gso7g0463 115 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0463 Gso-Chr7 4531751 4532741 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0463 29 88 Calmodulin-binding Proteins AT5G20810 55.000 6.16e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0463 K14488 - gmx:100796789 207.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0463 7 4531751 4532741 Gso7g0463 7 4531751 4532741 ECH
Gso7g0463 7 4531751 4532741 Gso16g0169 16 1887363 1888364 GST
Gso19g2178 19 50251602 50252237 Gso7g0463 7 4531751 4532741 PCT
Gso7g0463 7 4531751 4532741 Gso19g2178 19 50251602 50252237 PCT