Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0462 ATGGGCCAGTGCTACGGCAAGACCAATCTCGCGCCGGAAAATGACGCCACCGCGGCCACCACCAACACCGAGACCACCGCGGTTGTCGCCGGATCAGGCGACGTCCCGCCCTCTCCGCTGCCGGCCAAGGACACGCCCGCGCGGGCCAGCCCCTGGCCGAGTCCCTTCCCCCACGGCGGCGGTGGCGTGACGCCGTCACCGGCGAGGGGCACGCCGAGGAGGTTTTTCAGGCGGCCGTTCCCGCCGCCGTCTCCGGCGAAGCACATAAGGGCGTCTCTGGCAAAGCGGCTCGGGCACGCGAAGGCGGCGCCGAAGGAGGGGCCGATCCCAGAGGAGGAGGCGGCTGCGGCTGCGGCGGCGGCGGAGCAGACGCTGGATAAGAGCTTTGGGTATGGTAAGAATTTTGGGGCGAAATTCGAAATTGGGAAAGAAGTGGGGCGAGGGCATTTTGGTCATACTTGCTATGCTAAGGGGAAGAAGGGTGAACTCAAAGACCAGCCTGTTGCAATTAAAATCATTTCCAAGGCCAAGATGACCACTGCAATAGCAATTGAAGATGTTCGCAGAGAGGTGAAGATATTAAAAGCTCTATCTGGCCATAAACATCTCGTCAAATTTCATGATGCTTTTGAGGATGCCAACAATGTGTACATAGTTATGGAATTGTGTGAAGGTGGGGAGCTTCTTGACAGAATTTTGTCAAGGGGAGGAAAGTATTCTGAGGAGGATGCCAAGGTTATAGTTTTGCAGATCCTAAGCGTAGTTGCATTTTGTCATCTTCAAGGTGTTGTGCACCGTGACTTGAAACCTGAGAATTTCCTCTACACTTCGAGAAGTGAAGATGCTGACATGAAGTTGATTGATTTTGGTCTTTCTGACTTCATCCGACCAGATGAGCGACTGAATGACATTGTTGGGAGTGCGTATTATGTTGCACCTGAGGTCCTTCACAGGTCATATAGTCTGGAAGCAGATATATGGAGTATTGGTGTTATTACCTATATCTTATTATGTGGAAGTCGACCTTTCTACGCACGGACAGAATCTGGAATTTTTCGTGCAGTGCTTAGAGCTGATCCTAACTTTGATGATTTACCTTGGCCTACTGCCTCTGCTGAGGCCAAGGACTTTGTGAAACGGCTCCTAAACAAAGACTACCGGAAAAGAATGACAGCTGTCCAAGCTCTAACTCATCCTTGGTTGAGGGATGACAGCTGTCCCATCCCTTTAGATATATTAGTTTTTAAACTAGTGAAGGCTTATCTTCATGCAACACCATTCAAACGTGCAGCAGTGAAGGCCCTTTCAAAAGCCTTGCCAGAGGATCAATTGCCCTACCTTAGTGCACAATTCAGATTGTTGGAACCAAATAGAGACGGGCACATCTCCCTCGACAATTTCAAAATGGCTCTTGTACGCAATGCAACTGATGCCATGAGGGAGTCAAGGGTTCTTGAGATCATAAATGCGATGGAGCCACTTGCCTATAGAAAGATGGACTTTGAAGAATTTTGTGCAGCTACAATCAGCACACATCAATTGGAAGCACATGATAGGTGGGAAGATATTGCCTCAACTGCTTTTGAACATTTTGAGAGAGAAGGCAACCGTCTGATATCAGTTGAAGAATTAGCCAGAGAGTTGAATCTTGGGCCTTCAGCTTATTCAGTTCTCAAAGATTGGATAAGAAATACTGATGGAAAGCTTAGTTTACTTGGATATACAAAATTTTTGCATGGTGTGACTCTCCGTAGTTCAAACCCAAGACAACACCGGTAG 1779 0.4896 MGQCYGKTNLAPENDATAATTNTETTAVVAGSGDVPPSPLPAKDTPARASPWPSPFPHGGGGVTPSPARGTPRRFFRRPFPPPSPAKHIRASLAKRLGHAKAAPKEGPIPEEEAAAAAAAAEQTLDKSFGYGKNFGAKFEIGKEVGRGHFGHTCYAKGKKGELKDQPVAIKIISKAKMTTAIAIEDVRREVKILKALSGHKHLVKFHDAFEDANNVYIVMELCEGGELLDRILSRGGKYSEEDAKVIVLQILSVVAFCHLQGVVHRDLKPENFLYTSRSEDADMKLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYILLCGSRPFYARTESGIFRAVLRADPNFDDLPWPTASAEAKDFVKRLLNKDYRKRMTAVQALTHPWLRDDSCPIPLDILVFKLVKAYLHATPFKRAAVKALSKALPEDQLPYLSAQFRLLEPNRDGHISLDNFKMALVRNATDAMRESRVLEIINAMEPLAYRKMDFEEFCAATISTHQLEAHDRWEDIASTAFEHFEREGNRLISVEELARELNLGPSAYSVLKDWIRNTDGKLSLLGYTKFLHGVTLRSSNPRQHR* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0462 592 CDD STKc_CAMK 138 400 - -
Gso7g0462 592 Gene3D - 425 570 - -
Gso7g0462 592 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Gso7g0462 592 Gene3D - 419 509 - -
Gso7g0462 592 ProSitePatterns Protein kinases ATP-binding region signature. 145 171 IPR017441 GO:0005524
Gso7g0462 592 MobiDBLite consensus disorder prediction 39 53 - -
Gso7g0462 592 MobiDBLite consensus disorder prediction 29 86 - -
Gso7g0462 592 ProSiteProfiles EF-hand calcium-binding domain profile. 442 477 IPR002048 GO:0005509
Gso7g0462 592 PANTHER CDPK-RELATED KINASE 3 51 585 - -
Gso7g0462 592 Gene3D Transferase(Phosphotransferase) domain 1 226 411 - -
Gso7g0462 592 PANTHER SERINE/THREONINE-PROTEIN KINASE 51 585 - -
Gso7g0462 592 Pfam Protein kinase domain 139 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0462 592 ProSiteProfiles Protein kinase domain profile. 139 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0462 592 SUPERFAMILY Protein kinase-like (PK-like) 131 420 IPR011009 -
Gso7g0462 592 SMART serkin_6 139 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0462 592 SUPERFAMILY EF-hand 427 580 IPR011992 -
Gso7g0462 592 Gene3D Phosphorylase Kinase; domain 1 135 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0462 Gso-Chr7 4508031 4515855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0462 15 585 EF-hand Containing Proteins AT3G50530 59.836 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gso7g0462 Pkinase 3.2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0462 - - gmx:100796256 1131.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0462 7 4508031 4515855 Gso7g0462 7 4508031 4515855 ECH
Gso7g0462 7 4508031 4515855 Gso16g0168 16 1868403 1876650 GST