Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0461 ATGGAGGATTTAATCATATCTCCTTCTTCGTCTTCCTCTTTGGTCTCTCTACCCCATGAAAACCCAACACCAACACCAACCCTTCTACAAAAACTCCAATTCCTCCTCCAAAGCCAACCCGATTGGTGGGTCTACGCCATTTTCTGGCAAGCCTCACACGACGACAATGGCAACCTCTACTTATCCTTCGGAGAGGGCCATTTCCAAGGCACCAAAGAAACTTCCCCAAAGTCACTAACCATTCCCACAAAGAAGTTCATGAGAGCCCCCACAAACGACACCAACAACATCAACGACGCCGAGTGGTTCTACGTCGTGTCGTTGACTCGCACCTTCGCAGTCAACAATAATGCTTCTTCTTCTTCTTCTTCTCTCCCGGGAAAGTCTTTTGCTTTAGGCTCGGTTCTCTGGCTCAACAACATGCACGAGCTCCAATTCTACAACTGCGAGAGATCAAACGAGGCGCAAGTGCACGGGATCGAAACGTTGATCTGCATCCCGACACAAAATGGCGTCGTCGAAATGGGATCCTACGACACCATCAAACAAAACTGGAACCTCGTACAGCACGTTAAGTCTCTCTTCATAACCCCTCCAGATCCGGTTCCTGTCGAAATCCTCGACGACCACACCATCTCCTTCGCCGACATCGGCATCGTTGCCGGAGTCCAAGAAACCAAAAAGCGGAGAATAAACCAAACACAAACACAAAAACCTCCCAGGAAAAACGACAACTATGTCAACTCCGAACACTCCGATTCGGATTGTCCCACGTTGCCAACCGCCACCACCCCGACAACCTCGGAGCCGAAGAAAAGAGGGAGAAAACCGATTCTCGGACGCGAGACTCCGGTAAACCACGTGGAGGCAGAGAGACAACGTAGGGAGAAGCTCAATCATCGATTCTATGCGCTTCGTGCTGTTGTTCCGAATGTTTCGAGGATGGACAAGGCTTCGCTGTTGTCGGACGCTGTCGCCTACATCAGCGAGCTGAAGGCGAAGATTGAGTACTTAGAGTCGCAGCAGCCGAGAGACAGTAGTAAAAAAGTGAAGACAGAAATGACGGATACTCTAGATAACCATAGCACCACGACAATATCGACAGTGGTGGATCAAAGCGGGCCTGAACCTAGATTGGGCCCAAGCCCGCTTGGTCTCGAGGTCGATGTGAAAATCGTGGGGCCCGATGCCATGGTTAGGGTACAATCAGAAAATGTGAACCACCCTGGGGCGAGGCTAATGGGTGCTTTGAGAGACCTAGAATTTCAGGTTCATCACGCTAGCATGTCTTGTGTTAACGATCTCATGCTTCAAGATGTGGTTGTTAAGCTTCCCAATGGAATGAGGAGTGAAGAGGGTCTTAAATCTGCGATTCTGATGAGGTTGGATCAGTGA 1395 0.4982 MEDLIISPSSSSSLVSLPHENPTPTPTLLQKLQFLLQSQPDWWVYAIFWQASHDDNGNLYLSFGEGHFQGTKETSPKSLTIPTKKFMRAPTNDTNNINDAEWFYVVSLTRTFAVNNNASSSSSSLPGKSFALGSVLWLNNMHELQFYNCERSNEAQVHGIETLICIPTQNGVVEMGSYDTIKQNWNLVQHVKSLFITPPDPVPVEILDDHTISFADIGIVAGVQETKKRRINQTQTQKPPRKNDNYVNSEHSDSDCPTLPTATTPTTSEPKKRGRKPILGRETPVNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVAYISELKAKIEYLESQQPRDSSKKVKTEMTDTLDNHSTTTISTVVDQSGPEPRLGPSPLGLEVDVKIVGPDAMVRVQSENVNHPGARLMGALRDLEFQVHHASMSCVNDLMLQDVVVKLPNGMRSEEGLKSAILMRLDQ* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0461 464 PANTHER MYC 1 462 IPR045084 GO:0003700|GO:0006355
Gso7g0461 464 PANTHER TRANSCRIPTION FACTOR BHLH14 1 462 - -
Gso7g0461 464 SMART finulus 288 337 IPR011598 GO:0046983
Gso7g0461 464 Pfam Helix-loop-helix DNA-binding domain 286 331 IPR011598 GO:0046983
Gso7g0461 464 Gene3D - 280 345 IPR036638 GO:0046983
Gso7g0461 464 CDD bHLH_AtAIB_like 280 361 - -
Gso7g0461 464 MobiDBLite consensus disorder prediction 250 268 - -
Gso7g0461 464 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 282 331 IPR011598 GO:0046983
Gso7g0461 464 MobiDBLite consensus disorder prediction 269 293 - -
Gso7g0461 464 MobiDBLite consensus disorder prediction 1 22 - -
Gso7g0461 464 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 29 195 IPR025610 -
Gso7g0461 464 MobiDBLite consensus disorder prediction 228 293 - -
Gso7g0461 464 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 283 343 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0461 Gso-Chr7 4495818 4497793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0461 24 462 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00870 38.255 5.66e-77 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gso7g0461 bHLH-MYC_N 1.3e-47 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0461 - K13422 gmx:100795733 877.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0461 7 4495818 4497793 Gso7g0461 7 4495818 4497793 ECH
Gso7g0461 7 4495818 4497793 Gso16g0167 16 1854616 1856516 GST