Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0458 ATGAGCGGGAAGCCAGTGAGACCTCGTACCCGTGTGGGAAAGTACGAGCTGGGAAAAACCATTGGTGAGGGAAGCTTTGCTAAGGTCAAGTTTGCTAAGAACGTTGAGAATGGTAACCATGTTGCCATCAAAATCCTTGATCGTAACCACGTCCTCCGCCATAAGATGATGGAACAGCTGAAGAAAGAAATTTCAGCGATGAAGATGATCAATCATCCAAACGTTGTCAAAATTTACGAGGTGATGGCAAGCAAAACAAAGATCTATATTGTGCTAGAGTTGGTTAATGGAGGAGAACTATTTGACAAAATAGCTAAATATGGGAAACTTAAAGAGGATGAAGCAAGAAGTTATTTCCATCAATTAATCAATGCCGTTGATTACTGCCACAGCAGAGGCGTGTACCACAGAGATCTGAAGCCAGAGAATCTTCTTCTGGACTCAAATGCTATTCTGAAAGTTACAGATTTTGGATTGAGTACGTATGCGCAACAGGAGGATGAACTTCTCCGCACTGCTTGTGGAACTCCAAATTATGTTGCTCCTGAGGTGCTTAATGATAGAGGTTATGTTGGTTCTACATCTGATATCTGGTCCTGTGGAGTCATTCTCTTTGTGCTTATGGCTGGGTACTTGCCCTTTGATGAGCCAAATCATGCGACACTGTACCAAAAAATTGGCAGGGCCCAATTCACATGTCCATCATGGTTTTCTCCCGAGGCAAAGAAACTATTGAAGCGTATTCTTGATCCAAACCCTCTAACAAGGATAAAAATTCCTGAACTCTTAGAAGATGAATGGTTCAAAAAAGGATACAAGCCAACAACTTTTGTAGAGGAAGAGGATGTCAATGTAGATGATGTTGCTGCTGCTTTCAATGATTCTAAGGAAAATCTTGTGACAGAGAGAAAAGAGAAACCAGTGTCAATGAATGCTTTTGAGCTCATATCTAGGTCACAAAGTTTCAATCTTGAAAATTTGTTTGAGAAGCAGACAGGGATTGTTAAGAGAGAAACACATTTTACCTCACAGCGCCCTGCAAATGAAATCATGTCAAAAATTGAGGAAGCTGCGAAGCCTCTGGGATTTAATGTTCACAAGCGAAATTATAAGATGAAGCTGCAAGGTGATAAGAGCGGAAGGAAGGGTCACCTTTCAGTTGCTACAGAGGTTTTTGAAGTGGCTCCCTCCTTGCACATGGTGGAACTGCGAAAGACCGGGGGTGACACACTAGAGTTTCACAAGTTCTACAAAAGCTTTTCATCATCATCAGGGTTGCAAGACATAGTGTGGCATTCTGAAGCAAAACAATGA 1314 0.4178 MSGKPVRPRTRVGKYELGKTIGEGSFAKVKFAKNVENGNHVAIKILDRNHVLRHKMMEQLKKEISAMKMINHPNVVKIYEVMASKTKIYIVLELVNGGELFDKIAKYGKLKEDEARSYFHQLINAVDYCHSRGVYHRDLKPENLLLDSNAILKVTDFGLSTYAQQEDELLRTACGTPNYVAPEVLNDRGYVGSTSDIWSCGVILFVLMAGYLPFDEPNHATLYQKIGRAQFTCPSWFSPEAKKLLKRILDPNPLTRIKIPELLEDEWFKKGYKPTTFVEEEDVNVDDVAAAFNDSKENLVTERKEKPVSMNAFELISRSQSFNLENLFEKQTGIVKRETHFTSQRPANEIMSKIEEAAKPLGFNVHKRNYKMKLQGDKSGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHKFYKSFSSSSGLQDIVWHSEAKQ* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0458 437 Pfam Protein kinase domain 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0458 437 SMART serkin_6 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0458 437 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Gso7g0458 437 Pfam NAF domain 307 367 IPR004041 GO:0007165
Gso7g0458 437 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 9 434 - -
Gso7g0458 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Gso7g0458 437 Gene3D Phosphorylase Kinase; domain 1 6 94 - -
Gso7g0458 437 ProSiteProfiles Protein kinase domain profile. 15 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0458 437 PANTHER - 9 434 - -
Gso7g0458 437 Gene3D Kinase associated domain 1, KA1 304 432 - -
Gso7g0458 437 CDD CIPK_C 311 418 - -
Gso7g0458 437 SUPERFAMILY Protein kinase-like (PK-like) 12 304 IPR011009 -
Gso7g0458 437 Gene3D Transferase(Phosphotransferase) domain 1 95 296 - -
Gso7g0458 437 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0458 Gso-Chr7 4448379 4455889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0458 9 435 CBL-interacting serine-threonine protein kinases AT1G01140 74.654 0.0 683
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gso7g0458 Pkinase 7.7e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0458 - - gmx:100794136 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0458 7 4448379 4455889 Gso7g0458 7 4448379 4455889 ECH
Gso7g0458 7 4448379 4455889 Gso16g0165 16 1807879 1815074 GST