Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0456 ATGGGGAAGAAGGGAAGTGGTAGTTCATGGTTAACTGCTGTCAAAAGGGCATTCAGATCTCCCACCAAAGACAGTGACAAAAGGAGTGGCAGAAGAAGAGAAGACTGTGATCAAGAAGAAGACGAAGAAAAGAAGAGGGAAAAGAGAAGATGGATTTTCAGGAAGACTCACATGAGTCATGAAGGAGGGAACAACAACAACAACACTCAACAAAAGTTGAAGCATGATGTGGCAGCAAGTGGTGGTGGTTCTAGGACAGACCAGGATCAGAAGCATGCAGTTGCGGTGGCGGTGGCCACCGCAGAAGCCGCCATGGCCACCGCTCAGGCGGCGGTGGAGGTGGCAAGGTTGTCCAAACCTGCTAGCCATGCCAGGGAGCATTATGCTGCTGTTGTGATCCAAACTGCTTTTAGAGGGTATCTTGCTAGAAGAGCACTTCGTGCACTAAAGGGTTTGGTGAAGTTGCAAGCTTTGGTTAGGGGTCACAATGTTAGGAAGCAGGCAAAGATGACCCTTAGGTGCATGCAGGCTTTGGTTAGAGTTCAAGCAAGGGTTCTTGACCAACGCATAAGGTCTTCACTTGAAGGTAGTAGAAAATCCACTTTCAGTGACACTGCTAGTGTTTGGGACTCGCGGTATCTTCAGGACATTTCAGATAGGAAATCAATATCAAGAGAGGGAAGCAGCATTACAGATGACTGGGATGAAAGGCATCACACAGTTGAAGAAGTGAAGGCCATGTTGATGCAGAGGAAGGAAGCTGCTGCAATGAAGAGGGACAAGACCTTATCCCAAGCCTTTTCCCAACAGATTTGGAGGAATGGTAGGACATCATCAATTGGAAATGAAGATGAGTTGGAAGAGAGACCAAAATGGCTAGATCGGTGGATGGCCACAAAGCCATGGGAGAATAGAGGAAGGGCTTCAACTGATCAAAGAGACCACATTAAGACTGTGGAAATTGACACATCTCAGCCTTATTCATATCTAGGAACCAATTACAGAAGATCACATCCAAATTATCAATATAACCCAAACCATCACCAACCACAAAGGCATTCCATTGCTTCCCCACTCCATAGATCTCACCAAAATGGATCCTCCCTTCACCAGTCCCCTGCCACCCCTTCTCCTGCCAAATCGAGGCCCATCCAAGTCCGGTCCGCGAGTCCACGTTGCATTAGAGACGACAGAAGCTACCACACCTCCCAAACACCAAGCTTGAGGTCTAATTACCACTACGCAGGAAATTTGTACCAAAATGGGAGGGTTGTTGGAACTGGAACTAGTAATGGTGGTGCTACTGCTACATTGCCTAATTACATGGCGGCAACCGAGTCTGCAAAGGCTCGAATTCGGTCACAAAGCGCGCCAAGGCAGAGGCCATCCACACCAGAGAGGGACAGGGTTGGATCAGCCAAGAAAAGGCTTTCTTTTCCAGCTCCTGACCCTTATGGTGTGGGAGTGAGTTATGGAAACTATGGACATAGTTTAAGGAGTCCAAGCTTCAAGAGTGTGAGTGGATCACACTTTGGGGGGTTAGAACAACAATCAAATTACTCTTCTTGCTGCACTGAGAGTATTGGTGGGGGTCAGGTTTCTCCTTCTTCAACAGGTGACCTAAGGAGGTGGTTGAGATGA 1641 0.4778 MGKKGSGSSWLTAVKRAFRSPTKDSDKRSGRRREDCDQEEDEEKKREKRRWIFRKTHMSHEGGNNNNNTQQKLKHDVAASGGGSRTDQDQKHAVAVAVATAEAAMATAQAAVEVARLSKPASHAREHYAAVVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRIRSSLEGSRKSTFSDTASVWDSRYLQDISDRKSISREGSSITDDWDERHHTVEEVKAMLMQRKEAAAMKRDKTLSQAFSQQIWRNGRTSSIGNEDELEERPKWLDRWMATKPWENRGRASTDQRDHIKTVEIDTSQPYSYLGTNYRRSHPNYQYNPNHHQPQRHSIASPLHRSHQNGSSLHQSPATPSPAKSRPIQVRSASPRCIRDDRSYHTSQTPSLRSNYHYAGNLYQNGRVVGTGTSNGGATATLPNYMAATESAKARIRSQSAPRQRPSTPERDRVGSAKKRLSFPAPDPYGVGVSYGNYGHSLRSPSFKSVSGSHFGGLEQQSNYSSCCTESIGGGQVSPSSTGDLRRWLR* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0456 546 MobiDBLite consensus disorder prediction 303 320 - -
Gso7g0456 546 SMART iq_5 125 147 IPR000048 GO:0005515
Gso7g0456 546 SMART iq_5 148 169 IPR000048 GO:0005515
Gso7g0456 546 PANTHER IQ-DOMAIN 5-RELATED 6 546 - -
Gso7g0456 546 Gene3D - 123 177 - -
Gso7g0456 546 PANTHER PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 6 546 - -
Gso7g0456 546 MobiDBLite consensus disorder prediction 1 48 - -
Gso7g0456 546 MobiDBLite consensus disorder prediction 303 322 - -
Gso7g0456 546 MobiDBLite consensus disorder prediction 327 410 - -
Gso7g0456 546 Pfam Protein of unknown function (DUF4005) 390 494 IPR025064 -
Gso7g0456 546 ProSiteProfiles IQ motif profile. 150 177 IPR000048 GO:0005515
Gso7g0456 546 Pfam IQ calmodulin-binding motif 153 169 IPR000048 GO:0005515
Gso7g0456 546 Pfam IQ calmodulin-binding motif 129 147 IPR000048 GO:0005515
Gso7g0456 546 MobiDBLite consensus disorder prediction 19 48 - -
Gso7g0456 546 ProSiteProfiles IQ motif profile. 126 154 IPR000048 GO:0005515
Gso7g0456 546 MobiDBLite consensus disorder prediction 447 482 - -
Gso7g0456 546 MobiDBLite consensus disorder prediction 327 384 - -
Gso7g0456 546 MobiDBLite consensus disorder prediction 526 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0456 Gso-Chr7 4431631 4434916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0456 10 546 IQD Protein Family AT4G00820 56.757 1.33e-177 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0456 - - gmx:100786729 1033.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0456 7 4431631 4434916 Gso7g0456 7 4431631 4434916 ECH
Gso7g0456 7 4431631 4434916 Gso16g0161 16 1755890 1759154 GST