Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0443 ATGGATGAGTTGAACGGCGCCATGACGACGGAGAATAGCAATGCGGAGGTGGTTCGATGGGAGAGGTTTCTGCCGCGGATGGTGCTCAGAGTGCTGCTTGTAGAAGCTGATCATTCCACGCGCCAAATCATCGCCGCGCTTCTTCGCAAATGCAGTTACACAGTTATTGCGGTTCCAGATGGATTAAAGGCATGGGAAACGTTGAAGAAGAAGGCACCTGAGCTAGATCTCATATTAACAGAAGTGGAGCTACCAGCAATATCTGGATTTGCACTTCTTTCTTTGATCATGGAGCATGACATTTGTAAAAACATTCCAGTCATAATGATGTCTTCTCATGATTCGGTTAGCATGGCATTGAAATGCATGTTAAAAGGGGCAGTTGATTTTCTTATAAAACCCATTCGGAAGAATGAGCTTAGGAACTTGTGGCAACATGTATGGAGAAGGCACGCTATTAGCACTCCTACTCAAAATACAACCTTTTCACCGAAAAAACTTAAAACTGCCTCAGAAGACAATTCTGCAAGCAATAAATCTAGTGGTTCTGTGGCTTCCTCAAAGAAAAACAACGAATGCAGCGAGAGATTAAGTGAGGCTCAAGATGTGCCCCAGTATGTACATTGCCAAGTTATGCAAACTCTTGTGCAGAGCACTTGTACATCCCCTATTTTTGAAGCCAAGAGTACATATGTGGAAAATATGCAGGATGTGCCCCCGCTGAAAAGTTCTAAACTGAACAAAATTGATATGGTGAAGCACGAAAAGTTTGCCCAATTTGAAAGGGAATCAGCTGAGCATAATGATGAAACAGAAGATAAATCAGTTACAATTGTATCAGATGCTGCAAGGTGCGACAAAACTTCTGAATTAACAGAGTTAAGGCCAGAACAAGACTGTGGTGTTGCTGAACCTGAAACTGAAAACGAGGATGAAATCTTAAAATCTGAGTTAGACGGAGACAATTCTCATGTTAGTATGATGCAAGGATGCAGTGCTGAGCGGGTGAAACCTTCTAAAGGAGCTATTGACTTGATTGCCACAGTTGGAAATCTTCCAAAGCACCTTGATGAAAACTGTAGTCTCAATGGTGGTAATACAACCAAGTTTGATTGTGAAACGCAATTGGAACTTTCCTTAAGAAGTGATTTTCCTGGCAGCTCAGGTAATCAAGCAAGTGAAGCAACTGAGGAATCTCAAAGATTGAACCATTCAAATACTTCTGCCTTTTCTTGGTATAGTAATAGTAAATTGTTGCAGCCTCATTTTTCAACACCATCGATTACATTTCCTGAAGTAAACAACCTCAGTTGGGATTCTCATGAATCCCATAAATTATCTGGAATTACTTCTGGAAATTGTCAGTATGGTGGCTCAAATCAGAACCTGGAGAATATGATCGGTACAGTCATTTGTCAGTATGGACAAGTTACACCAAAATTATCAAACAGTCAATGTGGACTCTTACCTGTTTCTGGGGTTATCTCCGACCTTAAGTCTGAGGGACATGGTAATGTTTTCACTTCTTTGTTCTATGCACAATCTGGTATTCACCCTATGTCGAGTCCAAAACCTGTCTGCCAGAATGAGAGTTCTCCCTTTCCCACAAGTACCTCCACCCAGTCTAATCCTGAAAGCCACAACTCAGATCAACTACATGACTGCTCCAATGATTCTACTTGTCTTAATCAAAATGTAAAGGATAATACTGATTCAGATCACGCAAGGCATGATTCTCCTGTTGCTGATCAGAGTGCTGGTAATAGTTTATGCCATGATGCTGCAAATCATGTTAATAGTAGTGCATATGGAAGCATGGACAGTGGAAATGATGGAATTACTACTTCAGCTATAGTATCCAAGAACGCCCCAGATGGTTTCAGTGATAGTGGTTGTCATAATTATGATGGATTTAGAGTGACAGATCCTCATCGCTCCAGTCAAAGAGAAGCAGTGCTAGTGAAGTTTCGACTGAAGCGGAAAGAGAGATGCTTCGAGAAAAAGGTTCGATATCAAAGCCGGAAAAGACTGGCAGAGCAGCGGCCTCGGGTGAAGGGGCAGTTTGTACGTCAACATGATCATCCTGTCGCTGAGGCTGGTGGTGATTCGTGA 2112 0.4205 MDELNGAMTTENSNAEVVRWERFLPRMVLRVLLVEADHSTRQIIAALLRKCSYTVIAVPDGLKAWETLKKKAPELDLILTEVELPAISGFALLSLIMEHDICKNIPVIMMSSHDSVSMALKCMLKGAVDFLIKPIRKNELRNLWQHVWRRHAISTPTQNTTFSPKKLKTASEDNSASNKSSGSVASSKKNNECSERLSEAQDVPQYVHCQVMQTLVQSTCTSPIFEAKSTYVENMQDVPPLKSSKLNKIDMVKHEKFAQFERESAEHNDETEDKSVTIVSDAARCDKTSELTELRPEQDCGVAEPETENEDEILKSELDGDNSHVSMMQGCSAERVKPSKGAIDLIATVGNLPKHLDENCSLNGGNTTKFDCETQLELSLRSDFPGSSGNQASEATEESQRLNHSNTSAFSWYSNSKLLQPHFSTPSITFPEVNNLSWDSHESHKLSGITSGNCQYGGSNQNLENMIGTVICQYGQVTPKLSNSQCGLLPVSGVISDLKSEGHGNVFTSLFYAQSGIHPMSSPKPVCQNESSPFPTSTSTQSNPESHNSDQLHDCSNDSTCLNQNVKDNTDSDHARHDSPVADQSAGNSLCHDAANHVNSSAYGSMDSGNDGITTSAIVSKNAPDGFSDSGCHNYDGFRVTDPHRSSQREAVLVKFRLKRKERCFEKKVRYQSRKRLAEQRPRVKGQFVRQHDHPVAEAGGDS* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0443 703 ProSiteProfiles Response regulatory domain profile. 30 148 IPR001789 GO:0000160
Gso7g0443 703 Pfam CCT motif 649 691 IPR010402 GO:0005515
Gso7g0443 703 Gene3D - 27 229 - -
Gso7g0443 703 Pfam Response regulator receiver domain 31 142 IPR001789 GO:0000160
Gso7g0443 703 SUPERFAMILY CheY-like 29 156 IPR011006 -
Gso7g0443 703 MobiDBLite consensus disorder prediction 158 191 - -
Gso7g0443 703 MobiDBLite consensus disorder prediction 158 196 - -
Gso7g0443 703 MobiDBLite consensus disorder prediction 521 592 - -
Gso7g0443 703 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 700 IPR045279 GO:0009736
Gso7g0443 703 PANTHER PRR RESPONSE REGULATOR 7 700 - -
Gso7g0443 703 MobiDBLite consensus disorder prediction 676 703 - -
Gso7g0443 703 SMART REC_2 29 144 IPR001789 GO:0000160
Gso7g0443 703 CDD psREC_PRR 31 134 - -
Gso7g0443 703 MobiDBLite consensus disorder prediction 381 403 - -
Gso7g0443 703 MobiDBLite consensus disorder prediction 521 568 - -
Gso7g0443 703 ProSiteProfiles CCT domain profile. 649 691 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0443 Gso-Chr7 4267801 4272476 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0443 634 691 Response Regulator Gene Family AT5G24470 68.333 1.97e-18 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Gso7g0443 Response_reg 1.2e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0443 K12130 - gmx:100791698 1375.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0443 7 4267801 4272476 Gso7g0443 7 4267801 4272476 ECH
Gso7g0443 7 4267801 4272476 Gso16g0148 16 1597339 1602716 GST