Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0438 ATGGCTCCATCATTGGAAACCAGTAACGGTGAAGCCATGCACCTTAAACAGGTTGAAGAAGAGCAAGATGGTATACTTTTCGCCATGAACATGATGTCTACCATGGTGTATCCGTTTGTGGTTCGGACCGCGGTTGAGTTAGGGATCTTTGACATCATAGCGAAAGCCGGTGAAGGTGCGAAGCTATCAGCAGAGGAGATTATAGAGCAACTTGGCACAAAGAACCCTGAAGCTCCCACGATGTTGGACCGGCTTCTCAGGTTATTGGCTAGTCACTCCATGCTATCTTCCTCTCTTGATGCTGAAGATCTCCAACATGGCCAAAACTCTCCTAAGAGGCTCTATAGTCTTACCTATGCTTCCAAGTATTTTGTCACTGATGCTGATGGTGTCTCGTTCGGAGCTACCTTGAACTTACTTCTTGACAAGGTCTTCTTGGAAAGCTGGACTGAACTGAAAGGAGCCATCTTGGAAGGGGGTGTAGCATTCAACAGGGTTCATGGCATGCACTCATTTGAGTACCCAGCAGTTGATCCTAGGTTCAATGATGTTTTCAACAAAGCTATGTTCAACCTTACTACTATAGTCATGAAGAGGGTTCTTGAGTTTTACGAAGGGTTTAAGAACATTAATAGGCTTGTGGATGTTGGTGGTGGTCTTGGGATCAATCTCAATCTAATCACTTCTAAATATCCACATGTTCAAGGTGTTAATTTTGACTTGCCACATGTCATAGAGCATGCTCCTACATACCCCGGTATCGAACATGTTGGAGGAGATATGTTTGAGAGTGTTCCCAACGGAGACGCCATTTTTATGAAGTGGATACTTCACGATTGGAGTGATGAACAATGCTTGAAGTTGTTGAAGAATTGTCATAAAGCTATTCCTAGTGATGGAAAAGTGATTGTTGTGGACTTAATTCTTCCCATTTTGCCCGAGAGCACAGTTACTGCTAAGAGTGGTTTCCAAGCTGACCTCTTAATGATGACTCAAAACTCAGGAGGAAAAGAGAGAACCCAACATGAATTCATGGAATTGGCATTAAGTTCTGGATTCAGTGGCATCAAAATCGTTTGCAGTGTCTCTGGCTTCTGGGTTATGGAATTTTATAAGTAA 1119 0.4316 MAPSLETSNGEAMHLKQVEEEQDGILFAMNMMSTMVYPFVVRTAVELGIFDIIAKAGEGAKLSAEEIIEQLGTKNPEAPTMLDRLLRLLASHSMLSSSLDAEDLQHGQNSPKRLYSLTYASKYFVTDADGVSFGATLNLLLDKVFLESWTELKGAILEGGVAFNRVHGMHSFEYPAVDPRFNDVFNKAMFNLTTIVMKRVLEFYEGFKNINRLVDVGGGLGINLNLITSKYPHVQGVNFDLPHVIEHAPTYPGIEHVGGDMFESVPNGDAIFMKWILHDWSDEQCLKLLKNCHKAIPSDGKVIVVDLILPILPESTVTAKSGFQADLLMMTQNSGGKERTQHEFMELALSSGFSGIKIVCSVSGFWVMEFYK* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0438 372 SUPERFAMILY "Winged helix" DNA-binding domain 19 127 IPR036390 -
Gso7g0438 372 PIRSF O-mtase 5 372 IPR016461 GO:0008168
Gso7g0438 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 131 371 IPR029063 -
Gso7g0438 372 Gene3D Vaccinia Virus protein VP39 125 372 IPR029063 -
Gso7g0438 372 Gene3D - 7 124 IPR036388 -
Gso7g0438 372 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 372 IPR016461 GO:0008168
Gso7g0438 372 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 372 - -
Gso7g0438 372 CDD AdoMet_MTases 212 309 - -
Gso7g0438 372 PANTHER O-METHYLTRANSFERASE 1 372 IPR016461 GO:0008168
Gso7g0438 372 Pfam Dimerisation domain 40 90 IPR012967 GO:0046983
Gso7g0438 372 Pfam O-methyltransferase domain 149 354 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0438 Gso-Chr7 4223102 4227094 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0438 21 372 Monolignol Biosynthesis Gene Families AT5G54160 51.989 6.79e-135 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0438 K13066 - gmx:100789402 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0438 7 4223102 4227094 Gso7g0438 7 4223102 4227094 ECH