Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0437 ATGGAAGAAGAAAAAAGCTTCACCTATGCAATGCAGCTGGTGAACTCTAGCGTGCTATCCATGGCCATGCACTCAGCCATAGAGCTTGGCATTTTTGACATCATAGCCAAAGCAGGTGAAGGTGCCAAATTATCTGCCAAGGACATTGCAGCCAAGCTTCCATGCAAGAATTCAGAAGGAGCCACAATGTTGGATCGTATCCTAAGGCTCTTAGTATGTCACTCCATCATTGACTGCACAGTGGTTGCTGATCAACAACATGGTCCTCCTCCACATCTGCAACGGTTCTATGCCATGAACCCTGTGGCCAAATACTTTGCTTCCATTGATGGTGCTGGCTCACTAGGCCCTTTGATGGTCTTGACTCAGGACAAGGCCCTCCTTCATAGTTGGTACCAATTGAAAGATGCAATTCTAGAAGGAGGTATTCCTTTCAACAGGGTTCATGGAAAACACGTGTTTGAATATTCCGACATGAACTCGAGCTTCAATCAGCTTTTCATGGCAGCTATGACAAACCGTGCAACTTTAATAATGAAGAAGATTGTTGAATCCTACAAGGGGTTTGAGCACCTCAATAGCCTGGTGGACGTTGGAGGTGGCCTTGGTGTCACACTTAACATAGTCACTTCTAAATACCCTCACATTAAGGGTATCAATTTTGACTTGCCACATGTCATAGAACATGCCTCTACCTATCCTGGTGTTGAGCATGTGGGAGGAGATATGTTTGAAAGTGTGCCACAAGGAGATGCCATTTTGATGATGTGTGTACTTCATGATTGGAGTGATGAATGGTGCTTGAAGGTATTAAAGAATTGTTATGCTTCTATTCCTAGTGATGGAAAGGTGATTGTTGTGGATGGAATTCTTCCATTTGAACCAAAGACAACAGGTGCATCAAAGAGCATTTCCCAATTTGATGTACTGATGATGACTACAAACCCAGGAGGGAAGGAGCGAAGTGAAGAGGAATTCATGGCATTGGCAAAAGGAGCTGGATACAGTGGCATTAGATTCACATGCTTTGTCTCTGACTTATGGGTTATGGAGTTCTTCAAGTAA 1065 0.4376 MEEEKSFTYAMQLVNSSVLSMAMHSAIELGIFDIIAKAGEGAKLSAKDIAAKLPCKNSEGATMLDRILRLLVCHSIIDCTVVADQQHGPPPHLQRFYAMNPVAKYFASIDGAGSLGPLMVLTQDKALLHSWYQLKDAILEGGIPFNRVHGKHVFEYSDMNSSFNQLFMAAMTNRATLIMKKIVESYKGFEHLNSLVDVGGGLGVTLNIVTSKYPHIKGINFDLPHVIEHASTYPGVEHVGGDMFESVPQGDAILMMCVLHDWSDEWCLKVLKNCYASIPSDGKVIVVDGILPFEPKTTGASKSISQFDVLMMTTNPGGKERSEEEFMALAKGAGYSGIRFTCFVSDLWVMEFFK* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0437 354 PIRSF O-mtase 1 354 IPR016461 GO:0008168
Gso7g0437 354 Pfam Dimerisation domain 21 72 IPR012967 GO:0046983
Gso7g0437 354 SUPERFAMILY "Winged helix" DNA-binding domain 2 107 IPR036390 -
Gso7g0437 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 114 351 IPR029063 -
Gso7g0437 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 11 354 IPR016461 GO:0008168
Gso7g0437 354 PANTHER O-METHYLTRANSFERASE 5 354 IPR016461 GO:0008168
Gso7g0437 354 Gene3D - 1 106 IPR036388 -
Gso7g0437 354 Gene3D Vaccinia Virus protein VP39 110 354 IPR029063 -
Gso7g0437 354 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 5 354 - -
Gso7g0437 354 Pfam O-methyltransferase domain 131 336 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0437 Gso-Chr7 4217761 4220070 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0437 3 354 Monolignol Biosynthesis Gene Families AT5G54160 50.852 3.00e-131 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0437 K13066 - gmx:100788873 710.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0437 7 4217761 4220070 Gso7g0437 7 4217761 4220070 ECH