Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gso7g0434 | ATGGACGCATACTCCTCCGGCGAAGAAGTGGTTGTTAAGACGAGAAAACCATATACAATCACTAAGCAAAGGGAACGATGGACAGAGGAGGAGCATAATAGGTTTCTTGAAGCTTTGAAACTACACGGGCGAGCATGGCAGCGCATAGAAGAGCATATAGGAACAAAGACTGCCGTGCAAATCAGGAGTCACGCACAAAAGTTCTTTACAAAGCTGGAGAAAGAGGCCCTTGTAAAGGGTGTTCCAATTGGAAAGGCTCTTGATATAGACATTCCCCCTCCACGGCCCAAAAGAAAACCAAACAATCCTTATCCTCGGAAGACCAGGATTGGTAGCGCATCATTACATAGTGGAGCAAAGGATGGAAAACTCAATTTAGTTGAATCTTCACATGTTAACCAAGCACTGAACTTGGAAAAAGAACCACTTCCAGAGAAACATGATTTAGATGAAGGGATAACAACTGTAAAAGAAAATAAGGATGAGAACCGCGGAGCAGTATTTACTCTTCTCCAGGAGGTACCCTGTTCCTCTGTATCTTCAGCAAACAAGAGTTCAATAACAATGTCAGTGCCACTGGGAAATCCATGTGCCTTCAAGGAGATTACACCTTCAGTGAAAGAGGTAATTCCACGAGATGAAAAAACTGAATCTTTTGTCACTATTGAACTTGAAAATGGGACGTTGGAGATCAATGATAGAAAACAGACTAATGGCACTAGTAAAGACTCCACGTTAGAGAATTCTGATGCTTTACATATGAAATTGGTCCAAAATGAGAAAACAGATGGTCTTGATTGTGCATTAACAATAGATGGGATGCAAGGCAATCAGAATTACCCTAGACATGTTACTGTGCACGTTGTTGACGGGAACCTTGGAACAAATACTCAAAATCCATCACAAGATATGTTGTTTCGAGACTCTATGTTTCAGCCAATAGGAGGGGTTAATGGACAACAAAATGTTTTCACCAATTCAGCTCCATCGAACACAAGTGAAAGTCAAAATAACACTGTGCGATCTTCTGTTCATCAGTCATTTCTTCCTTATCCTCCCTTCACACAACACAACCAAGACGATTGCCAATCATTTTTTCACATGTCTTCAACATTTTCAAATCTTATTATCTCTACCTTGATGCAAAACCCAGCAGCCCATGCTGCAGCAAGTTTCGCTGCTACATTTTGGCCCTATGCAAATCCAGAAACTTCAGCAAATTCTCCTAGGTGCTCCCAAGGAGGTTTTACAAATAGACAAATTGGTTCCCCTCCAAGCGTTGCAGCTATTGCAGCTGCCACTGTAGCTGCTGCAACTGCATGGTGGGCAGCTCATGGATTGCTTCCTTTGTGTGCTCCTCTTCATACTTCTTTTGCCTGTTCTCCTGCATCAGTGACTGCAGTTCCATCAATGAATACGGGTGAAGCACCGGCACTGAAGGCAGAGCAAGAAAAGACTACTCTACAAAATCCTCCTCTTCAAGATCAGATGCTGGATCCAGAATACTCGGAAGCTCAACAAGCTCAACATTCAGCTTCAAAGTCACCAGCTGCCATTTTATCAGATTCTGAGAGTGGAGATGCCAAGTTAAATACTTCATCAAAGGCTACTGATCATGAGACGAACAAAACAATTCCCGAGCACCTAGATTCCAACAAAACAAAGGGCAGAAAACCGGTTGACCGTTCCTCATGTGGTTCCCACACGGCCTCTAGCAGCGATGTGGAAACTGATGCACTAGAGAAGGGTGAGAAAGGGAAGGAAGAGCCTGAAACACCTGATGCTAACCAATTAGCCATTGAGTTTAGTAATCGTCGTAGAAGTGTTAGCAATCTTACTGATTCTTGGAAAGAGGTCTCTGAAGAGGGGAGACTGGCCTTTCAGGCTCTATTCTCCAGAGAGGTGTTGCCTCAAAGCTTTTCACCTCCTCATGCTTTGAAGAATAAGAATCAGCAAATGGACAACGCCAATAATAACAAGCAAAACATAGATGACAAAGACGAAGATCCTGACAGCAAGAAATGCAGTTCTAATTATGAAGCAATGCAGAAAAACCTGCCATTTGTAGAAAATAACGAGGGACTGTTAACCATAGGGCTTGGACAAGGAAAGCTTAAGACTCGTCGAACAGGCTTTAAACCCTACAAAAGATGTTCCATGGAGGCCAAGGAAAATAGGGTTGGAGCGAGCAACAATCAAGGTGAAGAGCAAGGTTGTAAGAGAATACGTTTGGAAGGGGAGACTTCGACTTGA | 2253 | 0.4301 | MDAYSSGEEVVVKTRKPYTITKQRERWTEEEHNRFLEALKLHGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEALVKGVPIGKALDIDIPPPRPKRKPNNPYPRKTRIGSASLHSGAKDGKLNLVESSHVNQALNLEKEPLPEKHDLDEGITTVKENKDENRGAVFTLLQEVPCSSVSSANKSSITMSVPLGNPCAFKEITPSVKEVIPRDEKTESFVTIELENGTLEINDRKQTNGTSKDSTLENSDALHMKLVQNEKTDGLDCALTIDGMQGNQNYPRHVTVHVVDGNLGTNTQNPSQDMLFRDSMFQPIGGVNGQQNVFTNSAPSNTSESQNNTVRSSVHQSFLPYPPFTQHNQDDCQSFFHMSSTFSNLIISTLMQNPAAHAAASFAATFWPYANPETSANSPRCSQGGFTNRQIGSPPSVAAIAAATVAAATAWWAAHGLLPLCAPLHTSFACSPASVTAVPSMNTGEAPALKAEQEKTTLQNPPLQDQMLDPEYSEAQQAQHSASKSPAAILSDSESGDAKLNTSSKATDHETNKTIPEHLDSNKTKGRKPVDRSSCGSHTASSSDVETDALEKGEKGKEEPETPDANQLAIEFSNRRRSVSNLTDSWKEVSEEGRLAFQALFSREVLPQSFSPPHALKNKNQQMDNANNNKQNIDDKDEDPDSKKCSSNYEAMQKNLPFVENNEGLLTIGLGQGKLKTRRTGFKPYKRCSMEAKENRVGASNNQGEEQGCKRIRLEGETST* | 751 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gso7g0434 | 750 | MobiDBLite | consensus disorder prediction | 324 | 344 | - | - | |
| Gso7g0434 | 750 | PANTHER | SWI/SNF COMPLEX-RELATED | 2 | 732 | - | - | |
| Gso7g0434 | 750 | ProSiteProfiles | Myb-like domain profile. | 19 | 69 | IPR001005 | - | |
| Gso7g0434 | 750 | MobiDBLite | consensus disorder prediction | 643 | 659 | - | - | |
| Gso7g0434 | 750 | SMART | sant | 23 | 71 | IPR001005 | - | |
| Gso7g0434 | 750 | Gene3D | - | 26 | 73 | - | - | |
| Gso7g0434 | 750 | MobiDBLite | consensus disorder prediction | 597 | 616 | - | - | |
| Gso7g0434 | 750 | Coils | Coil | 646 | 666 | - | - | |
| Gso7g0434 | 750 | MobiDBLite | consensus disorder prediction | 723 | 750 | - | - | |
| Gso7g0434 | 750 | MobiDBLite | consensus disorder prediction | 638 | 677 | - | - | |
| Gso7g0434 | 750 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 22 | 71 | IPR006447 | GO:0003677 | |
| Gso7g0434 | 750 | MobiDBLite | consensus disorder prediction | 533 | 562 | - | - | |
| Gso7g0434 | 750 | PANTHER | PROTEIN LHY | 2 | 732 | - | - | |
| Gso7g0434 | 750 | MobiDBLite | consensus disorder prediction | 502 | 618 | - | - | |
| Gso7g0434 | 750 | ProSiteProfiles | SANT domain profile. | 22 | 73 | IPR017884 | - | |
| Gso7g0434 | 750 | SUPERFAMILY | Homeodomain-like | 18 | 74 | IPR009057 | - | |
| Gso7g0434 | 750 | MobiDBLite | consensus disorder prediction | 86 | 120 | - | - | |
| Gso7g0434 | 750 | MobiDBLite | consensus disorder prediction | 502 | 532 | - | - | |
| Gso7g0434 | 750 | MobiDBLite | consensus disorder prediction | 660 | 675 | - | - | |
| Gso7g0434 | 750 | CDD | SANT | 26 | 69 | IPR001005 | - | |
| Gso7g0434 | 750 | MobiDBLite | consensus disorder prediction | 575 | 594 | - | - | |
| Gso7g0434 | 750 | Pfam | Myb-like DNA-binding domain | 24 | 67 | IPR001005 | - | |
| Gso7g0434 | 750 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 19 | 73 | IPR017930 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Gso7g0434 | Gso-Chr7 | 4181763 | 4192946 | Wgd |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | MYB-related | Gso7g0434 | Myb_DNA-binding | 2e-13 | CL0123 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gso7g0434 | K12133 | - | gmx:100101859 | 1409.82 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Gso7g0434 | 7 | 4181763 | 4192946 | Gso7g0434 | 7 | 4181763 | 4192946 | ECH | |
| Gso7g0434 | 7 | 4181763 | 4192946 | Gso16g0142 | 16 | 1521975 | 1535051 | GST |