Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0433 ATGACGATGATGATGGAGTTGGGTGGACCCAGAGTGATCGGGGATTACATAGTGGGTCCTCGAATCGGGTCGGGTTCGTTCGCGGTGGTGTGGCGTGCAAGGAATCGAAGTTCGGGTTTGGAGTATGCGGTTAAGGAGATTGATAAGAGACACTTGAGTCCCAAAGTGAGGGAAAATCTTCTCAAAGAGATTTCTATCCTTAGCACCATCCATCACCCCAACATCATTCGACTCTTCGAGGCAATTCAGACCAATGACAGGATTTACCTTGTTTTGGAGTATTGTGCTGGTGGGGACCTTGCTGCTTACATTCATCGCCATGGCAAAGTTTCTGAACCGGTTGCACACCATTTCATGAGGCAATTGGCTGCTGGGTTGCAGGTGCTTCAAGAAAAGAACCTCATCCATAGAGATTTAAAACCACAGAATTTACTGTTGGCAACTACTGCAGCTACACCAGTTATGAAAATAGGGGATTTTGGTTTTGCAAGGTCTCTTACACCCCAGGGATTGGCTGATACGCTATGTGGTTCACCCTATTACATGGCTCCAGAGATAATTGAAAATCAGAAGTATGATGCCAAGGCTGATTTATGGAGTGTTGGGGCAATATTGTATCAACTAGTGATTGGGAGGCCACCATTTGATGGAAATAGTCAATTGCAGCTTTTTCAAAATATTTTGGCATCTACTGAACTGCACTTTCCACCAGATGCAATAAAAGTGCTACACTCTGATTGCTTGGATCTTTGCAGAAATCTTTTACGTCGAAACCCAGATGAGAGATTAACATTCAAGGCATTCTTCAATCACAATTTCCTACGGGAACCCAGGCCAACCATGAATATTGAGCAGTTTCAATTACACCAATCAGAAAGATTAACAAATCATCAATTAGGTGGCTCTACCTCCGAGAAGATTTCTGAATCACATTCTAAGTATAATCCAATGGTAGTCAGTTCAGCTGCTGATGAAACCATGCTGTTGCAAAGAAAGGATGGCAAGATTACAGCTGGTACTACGAATGCTAAAGGTAAAGGGTCAACTCCAACTATTGCAAGTGATAAGCTGGGGAAGGTTGTTGATGCTGGTGCTCATTTGTCAAACCAACCGCGAGTTTCCCATTTAATGGAGTCCATCGAGAAAGATTATGTCTTTGTCAATTCCCATTTCACATCATTGGAGGCTTTCTCTGACTACTTTGAAGCATCTGTGCAAGATAGTTCCTCGCACAGGATTTCTCTGTTTCCTTCAAAGAGGACTAATATGGAGGTTAGAGATGCAAAACAAACAAAGGATCTGCCCTCTTCCTCCACTGAAGGATTAGAAAATTTAAAAAGCAATAAACTTGAGGCATGTGCAGCTTCCTGTGAATTTGCTGCCTTAAGGAAAGAACATCAAATTTCCCCACTGCACCCTTCAAACAGGTTACAGTTGTTGCATCAGTATGTGCAGATCATTGCTGAACTTTCACAAGAAAAGTATAACACAGGACTGTATCTAGAGTCTCTTGCAGTTGAGTTGGTGGTTTTGGCTATATGGAAACAGACTCTAGAAATTTGTAGCTCTTGGATGGCCTCAATTACAAAGAGTGAGTTGCCTGGAAGCAGTTCAGCTAATGAATCCATATCTGCCAGAGATATTAACTTGCCACAGTCTACAGAACAGAAAATAAATTTTAGTGATCCTTCATCTATCTCCCTGTGGGCCAAACACGAGTTTATTGATGCAGTTGATCGTGCTGAGAAACTATCATGTCATGTTCAAAATATGGATAAGGCAACTGAGATGCCAGATGCAATGGAAATTATATTCCAAAAAGCTCTCTTAATTGGGACAAGTGGTGCTGTAGATGAATATATGGAGATCAGAGATAGGGCTGCTGCATCTTACTCCAAAGCGATGCTTCTACTTTCATTTATTGTGGCAGAAGCAGAGAACCTTCCACTGAACCCACCATTTTCACTTGTTGCCACTAATAAGGAGCGAATCTCACAATATATTCACAGCTTGCAGTCTCGTAAAGAATCTTCATCAGAGTCCTCTTCAAAGAAAGTGCTTACACTTTTATCAAAGTAA 2079 0.419 MTMMMELGGPRVIGDYIVGPRIGSGSFAVVWRARNRSSGLEYAVKEIDKRHLSPKVRENLLKEISILSTIHHPNIIRLFEAIQTNDRIYLVLEYCAGGDLAAYIHRHGKVSEPVAHHFMRQLAAGLQVLQEKNLIHRDLKPQNLLLATTAATPVMKIGDFGFARSLTPQGLADTLCGSPYYMAPEIIENQKYDAKADLWSVGAILYQLVIGRPPFDGNSQLQLFQNILASTELHFPPDAIKVLHSDCLDLCRNLLRRNPDERLTFKAFFNHNFLREPRPTMNIEQFQLHQSERLTNHQLGGSTSEKISESHSKYNPMVVSSAADETMLLQRKDGKITAGTTNAKGKGSTPTIASDKLGKVVDAGAHLSNQPRVSHLMESIEKDYVFVNSHFTSLEAFSDYFEASVQDSSSHRISLFPSKRTNMEVRDAKQTKDLPSSSTEGLENLKSNKLEACAASCEFAALRKEHQISPLHPSNRLQLLHQYVQIIAELSQEKYNTGLYLESLAVELVVLAIWKQTLEICSSWMASITKSELPGSSSANESISARDINLPQSTEQKINFSDPSSISLWAKHEFIDAVDRAEKLSCHVQNMDKATEMPDAMEIIFQKALLIGTSGAVDEYMEIRDRAAASYSKAMLLLSFIVAEAENLPLNPPFSLVATNKERISQYIHSLQSRKESSSESSSKKVLTLLSK* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0433 692 CDD STKc_ATG1_ULK_like 22 273 - -
Gso7g0433 692 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Gso7g0433 692 Pfam Protein kinase domain 18 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0433 692 SUPERFAMILY Protein kinase-like (PK-like) 12 318 IPR011009 -
Gso7g0433 692 Gene3D Transferase(Phosphotransferase) domain 1 9 345 - -
Gso7g0433 692 PANTHER BNAC06G18300D PROTEIN 461 667 - -
Gso7g0433 692 PANTHER BNAC06G18300D PROTEIN 11 304 - -
Gso7g0433 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Gso7g0433 692 ProSiteProfiles Protein kinase domain profile. 16 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0433 692 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 461 667 IPR045269 GO:0004674|GO:0006914
Gso7g0433 692 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 11 304 IPR045269 GO:0004674|GO:0006914
Gso7g0433 692 SMART serkin_6 16 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0433 Gso-Chr7 4175001 4180910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0433 12 292 CBL-interacting serine-threonine protein kinases AT2G30360 33.681 5.05e-49 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Gso7g0433 Pkinase 3e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0433 - K08269 gmx:100779262 1299.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0433 7 4175001 4180910 Gso7g0433 7 4175001 4180910 ECH
Gso7g0433 7 4175001 4180910 Gso16g0141 16 1515075 1520664 GST