Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso7g0431 | ATGGAGTTGATGCAAGAAGTGAAAGGGTATTCTGATGGCAGAGAGGAGGAGGAGGAGGAAGAGGAAGCAGCAGAAGAAATCATCACAAGAGAAGAAAGCAGCAGGTTGTTACACCAGCACCAGGAGGCAGCAGGTTCCAATTTCATCATCAACAATAATCATCATCATCATCAACATCACCACCACCACACAACAAAGCAGCTAGACTTCATGGACTTGTCACTTGGTAGCAGCAAGGATGAAGGGAATTTGCAAGGATCATCTTCTTCTGTCTATGCTCATCATCATCATGCAGCAAGTGCTAGTTCTTCTGCCAATGGTAACAACAACAACAGCAGCAGCAGCAACTTGCAGCAACAGCAGCAGCAGCCTGCTGAGAAGGAGCACATGTTTGATAAAGTAGTGACACCAAGTGATGTGGGGAAGCTGAACCGGTTGGTGATACCAAAGCAGCATGCTGAGAAGTATTTCCCTCTTGATTCCTCAGCCAATGAGAAGGGTCTGTTGCTGAATTTTGAGGACAGGAATGGTAAGTTGTGGAGGTTCAGGTACTCCTATTGGAACAGCAGCCAGAGCTATGTGATGACCAAAGGTTGGAGCCGTTTTGTTAAGGAGAAGAAGCTTGATGCTGGTGACATGGTGTCCTTCCAGCGTGGTGTTGGGGAGTTGTATAGGCATAGGTTGTACATAGATTGGTGGAGAAGGCCTGATCATCATCACCATCACCATCATGGCCCTGACCATTCAACCACACTCTTCACACCTTTCTTAATTCCCAATCAGCCTCATCACTTAATGTCCATCAGATGGGGTGCCACTGGCAGATTGTACTCCCTCCCTTCCCCAACCCCACCACGCCACCATGAACACCTCAATTACAACAATAACGCCATGTATCATCCCTTTCATCACCATGGTGCTGGAAGTGGAATTAATGCTACTACTCATCACTACAACAACTATCATGAGATGAGTAGTACTACTACTTCAGGATCTGCAGGCTCAGTCTTTTACCACAGGTCAACACCCCCAATATCAATGCCATTGGCTGACCACCAAACCTTGAACACAAGGCAGCAGCAACAACAACAACAACAACAAGAGGGAGCTGGCAATGTTTCTCTTTCCCCTATGATCATTGATTCTGTTCCAGTTGCTCACCACCTCCATCATCAACAACACCATGGTGGCAAGAGTAGTGGTCCTAGTAGTACTAGTACTAGTCCTAGCACTGCAGGGAAAAGACTAAGGCTATTTGGGGTCAACATGGAATGTGCTTCTTCAACATCAGAAGACCCCAAATGCTTCAGCTTGTTGTCCTCATCTTCAATGGCTAATTCCAATTCACAACCACCACTTCAGCTTTTGAGGGAAGATACACTTTCGTCATCATCGGCAAGGTTTGGGGATCAGAGAGGAGTAGGGGAACCTTCAATGCTTTTTGATCTGGACCCTTCTTTGCAATACCGGCAGTGA | 1476 | 0.4654 | MELMQEVKGYSDGREEEEEEEEAAEEIITREESSRLLHQHQEAAGSNFIINNNHHHHQHHHHHTTKQLDFMDLSLGSSKDEGNLQGSSSSVYAHHHHAASASSSANGNNNNSSSSNLQQQQQQPAEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSANEKGLLLNFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDMVSFQRGVGELYRHRLYIDWWRRPDHHHHHHHGPDHSTTLFTPFLIPNQPHHLMSIRWGATGRLYSLPSPTPPRHHEHLNYNNNAMYHPFHHHGAGSGINATTHHYNNYHEMSSTTTSGSAGSVFYHRSTPPISMPLADHQTLNTRQQQQQQQQQEGAGNVSLSPMIIDSVPVAHHLHHQQHHGGKSSGPSSTSTSPSTAGKRLRLFGVNMECASSTSEDPKCFSLLSSSSMANSNSQPPLQLLREDTLSSSSARFGDQRGVGEPSMLFDLDPSLQYRQ* | 492 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso7g0431 | 491 | Pfam | B3 DNA binding domain | 131 | 234 | IPR003340 | GO:0003677 | |
Gso7g0431 | 491 | MobiDBLite | consensus disorder prediction | 13 | 27 | - | - | |
Gso7g0431 | 491 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR NGA2 | 67 | 448 | - | - | |
Gso7g0431 | 491 | SUPERFAMILY | DNA-binding pseudobarrel domain | 127 | 219 | IPR015300 | - | |
Gso7g0431 | 491 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Gso7g0431 | 491 | CDD | B3_DNA | 129 | 218 | IPR003340 | GO:0003677 | |
Gso7g0431 | 491 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 67 | 448 | IPR044800 | GO:0003700 | |
Gso7g0431 | 491 | ProSiteProfiles | B3 DNA-binding domain profile. | 131 | 231 | IPR003340 | GO:0003677 | |
Gso7g0431 | 491 | MobiDBLite | consensus disorder prediction | 396 | 412 | - | - | |
Gso7g0431 | 491 | MobiDBLite | consensus disorder prediction | 442 | 491 | - | - | |
Gso7g0431 | 491 | MobiDBLite | consensus disorder prediction | 79 | 125 | - | - | |
Gso7g0431 | 491 | MobiDBLite | consensus disorder prediction | 442 | 469 | - | - | |
Gso7g0431 | 491 | MobiDBLite | consensus disorder prediction | 322 | 339 | - | - | |
Gso7g0431 | 491 | SMART | B3_2 | 131 | 232 | IPR003340 | GO:0003677 | |
Gso7g0431 | 491 | Coils | Coil | 14 | 34 | - | - | |
Gso7g0431 | 491 | MobiDBLite | consensus disorder prediction | 388 | 412 | - | - | |
Gso7g0431 | 491 | MobiDBLite | consensus disorder prediction | 322 | 349 | - | - | |
Gso7g0431 | 491 | MobiDBLite | consensus disorder prediction | 79 | 128 | - | - | |
Gso7g0431 | 491 | Gene3D | - | 125 | 245 | IPR015300 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso7g0431 | Gso-Chr7 | 4135888 | 4138626 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso7g0431 | 118 | 428 | RAV Transcription Factor Family | AT2G46870 | 45.833 | 2.05e-73 | 233 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | B3 | Gso7g0431 | B3 | 1.1e-27 | CL0405 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso7g0431 | - | - | gmx:100778733 | 825.469 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso7g0431 | 7 | 4135888 | 4138626 | Gso7g0431 | 7 | 4135888 | 4138626 | ECH | |
Gso7g0431 | 7 | 4135888 | 4138626 | Gso16g0139 | 16 | 1478979 | 1481744 | GST |