Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0430 ATGGATGATGATATTGTAGGACTCGGTTTTCGTCCAACAGAAGAAGAACTTGTGGACTTTTACCTCAAACACATGTTGCTCGGCAATGATCCCCGTGCCCACGTCATCCCTGTCATTGATCTTTGCGATGTGGAACCTTGGGATGTACCAGTGATGTTAGCAAAATCATCATCAGCTATACGATTTGGTGACCCATATTGGTTTTTCTTCAGCCCTGTTGATTTCAAGTATTCAAGAAGTAAAAGGTTTAACAGGACAACCAAGTGTGGCTTCTGGAAAGCCACTGGGAAAGACCGTGACATTAGGACAGGGGACACTAACACCGTCATTGGGACTAAGAAGACTCTTGTTTACTATCAAGGCCGTGTTTCCTGTGGTGTCAAGTCCAACTGGGTTATTCACGAATATCATGCTGTTACCTTTCATGAAAGCCAGAGGACTTTTGTTTTATGTTGCTTGATCAAGAAACCTGGGAAAGCAACTGAAGGTGGAACTGATGCACTGATCTGCGATGAAGGGGAGCCCAGTAGAAGCATGGTTTCTGACTATGAAAATCAGGCAACAGCAGAAGGAATTCCATCTGAAGGTACTTTTACCGGAATGGAAACAATCTTTCAGGCAACCCCTTGGGCAGAGAATTGCTTCTCTCCAATACAACAGTCTCCGACTAGTATTGAGCAGGAAGGAGCATCCTTTCCAAACTATGCATTTAACAATGCCTATTTTAGAAATGAAGACAATGTTATGCAGACTCCATTTGAAACTACAAAGGAAGATGAATTCCTGAATTCAATCTTAGCCGGTGAAAGTATAGTTATCAATGAAGAAAATAAGCATAATTTTGTCCATAGCTCCACCCAATCAGAGTCATTGAGAAGGGTATACTTAGAAAGCAGTGATACAGATGCTGAAGTCATCTCTAAACTGGATGACAATATTGTAGATATTTCAACAGCATTTACTGAATATCCTAATTCAGATGAATACTATTCATCAAAAAGGTTTAAATCATCACATGATACTGTTTATGGTGACATATGTTTTCCATCTTCTAACCTTGAAGCAAACCAAGAGAAAAACGAGAGTATGTTTCAAGATAATTTCTGGGGAGCGGAGACATCATCTTGTGACTCGACAATAGATAAACCTTTGGAGATCAATTATATTGATATTTCTAGTTCTCCTTTCACTCCATGGAGTTGGGAAAATTAA 1212 0.3993 MDDDIVGLGFRPTEEELVDFYLKHMLLGNDPRAHVIPVIDLCDVEPWDVPVMLAKSSSAIRFGDPYWFFFSPVDFKYSRSKRFNRTTKCGFWKATGKDRDIRTGDTNTVIGTKKTLVYYQGRVSCGVKSNWVIHEYHAVTFHESQRTFVLCCLIKKPGKATEGGTDALICDEGEPSRSMVSDYENQATAEGIPSEGTFTGMETIFQATPWAENCFSPIQQSPTSIEQEGASFPNYAFNNAYFRNEDNVMQTPFETTKEDEFLNSILAGESIVINEENKHNFVHSSTQSESLRRVYLESSDTDAEVISKLDDNIVDISTAFTEYPNSDEYYSSKRFKSSHDTVYGDICFPSSNLEANQEKNESMFQDNFWGAETSSCDSTIDKPLEINYIDISSSPFTPWSWEN* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0430 403 Gene3D NAC domain 13 161 IPR036093 GO:0003677|GO:0006355
Gso7g0430 403 PANTHER NAC DOMAIN CONTAINING PROTEIN 49 6 326 - -
Gso7g0430 403 SUPERFAMILY NAC domain 6 156 IPR036093 GO:0003677|GO:0006355
Gso7g0430 403 ProSiteProfiles NAC domain profile. 4 156 IPR003441 GO:0003677|GO:0006355
Gso7g0430 403 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 326 - -
Gso7g0430 403 Pfam No apical meristem (NAM) protein 7 137 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0430 Gso-Chr7 4115529 4118702 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0430 1 156 NAC Transcription Factor Family AT3G49530 45.963 2.62e-41 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso7g0430 NAM 9.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0430 - - gmx:100780890 743.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0430 7 4115529 4118702 Gso16g0138 16 1457300 1460577 GST