Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0428 ATGGATGATGATATTGTAGGACTCGGTTTTCGTCCAACAGAAGAAGAACTTGTGGACTTTTACCTCAAACACATGTTGCTCGGCAATGATCCCCGTGCCCACGTCATCCCTGTCATTGATCTTTGCGATGTGGAACCTTGGGATGTACCAGTGATGTTAGCAAAATCATCATCAACTATACGATTTGGTGACCCAGATTGGTTTTTCTTCAGCCCTGTTGATTTCAAGTATTCAAGAAGTAAAAGGTTTAACAGGACAACCAAGTGTGGCTTCTGGAAACCCACTGGAGTAGACCGTGAAGTTAGGACCTTTGAGACCAACACTCTAATTGGGACTAAGAAAACTCTTGTTTTCTATAAAGGCCGTGTTTCCCGCGGTGTCAAGTCCATCTGGGTTATTCACGAATATCACGCTGTTACCTTTCATGAGAGCCAGAGGACTTTTGTTTTATGTCGCTTGATGAAGAAACCTGGGAAAACAACTGAAGGCGGAACTGATGCACTCATCTGTGATGAAGGGGAGCCCAGTAGACACATGATTTCTGTCTATGGAAATCAGGAAAAAGCAGAAGGAATTCCATCTGGAAGTACTTGTATTGGAATGGAAACAATCCTTCAGGCAACCCCTCAGGCAGAGAAATACTTCTCTCCAATACACCAGAGTCAAACTGGTATTGAGGAAGAAGCATCTTTTTCAAGCTATCCATTTAACAATGCCTATTTTAGAAATGAAAACAACCCTATGCAGACTTCATTTGAAACTACAGAGGAAATGCAGACTTCATTTGAAATTACTGAGGAAGTTGAATTCCTAAACTCAATTTTAGTTGATGAGAGTTTTGTTATCGATAAAGAAAGTATGCATGTTTTTGTTAATAGCTCCACCCAATCAGAGTCATTGAGTGATACAGATGCAGAAGTTGTCTCTAAACTGGATGGCAATACTGTGGATATTTCAACAGTGTGCCATGAATATCCTAATTCAGATGAATACCATTCATCAAAAAGGTTTAAATCATCACATGATGTTGTCCATGGTGGCATATGTTTTCCATCTTCTAATCCTGAAGCAAAACAAGAAACAAAGGAAAGCATGTTTCAAGATGACTTGTGGGGATTGGAAACATCCTCTTGTGAGTCAACTGCAGACAAACCTTTGAAGATTAGTTGCATTGAAATTTCTAGTTCTCCTTCCACTTCATGGAGATGGGAAAATTAA 1218 0.3998 MDDDIVGLGFRPTEEELVDFYLKHMLLGNDPRAHVIPVIDLCDVEPWDVPVMLAKSSSTIRFGDPDWFFFSPVDFKYSRSKRFNRTTKCGFWKPTGVDREVRTFETNTLIGTKKTLVFYKGRVSRGVKSIWVIHEYHAVTFHESQRTFVLCRLMKKPGKTTEGGTDALICDEGEPSRHMISVYGNQEKAEGIPSGSTCIGMETILQATPQAEKYFSPIHQSQTGIEEEASFSSYPFNNAYFRNENNPMQTSFETTEEMQTSFEITEEVEFLNSILVDESFVIDKESMHVFVNSSTQSESLSDTDAEVVSKLDGNTVDISTVCHEYPNSDEYHSSKRFKSSHDVVHGGICFPSSNPEAKQETKESMFQDDLWGLETSSCESTADKPLKISCIEISSSPSTSWRWEN* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0428 405 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 338 - -
Gso7g0428 405 Pfam No apical meristem (NAM) protein 7 137 IPR003441 GO:0003677|GO:0006355
Gso7g0428 405 PANTHER NAC DOMAIN CONTAINING PROTEIN 49 6 338 - -
Gso7g0428 405 Gene3D NAC domain 13 161 IPR036093 GO:0003677|GO:0006355
Gso7g0428 405 SUPERFAMILY NAC domain 6 156 IPR036093 GO:0003677|GO:0006355
Gso7g0428 405 ProSiteProfiles NAC domain profile. 4 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0428 Gso-Chr7 4039124 4041911 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0428 6 163 NAC Transcription Factor Family AT4G35580 44.785 7.38e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso7g0428 NAM 3.5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0428 - - gsj:114419327 808.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0428 7 4039124 4041911 Gso7g0428 7 4039124 4041911 ECH
Gso7g0428 7 4039124 4041911 Gso16g0137 16 1440267 1443851 GST