Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0427 ATGGAGAACAACATAATTTCCATATGTGATCACATGCCTGTAGGATTCAGATTCCGTCCCACAGATGAAGAGCTTGTGAACTATTACCTCAAACACAAGCTTCTGGCCGATGATTTCCCTGTCCACATCATCCCTGAGATCGACCTTTGCAAAGTGGAACCTTGGGATGTACCAGAAAGATCAGTGATCAAATCCGATGACCCAGAATGGTTTTTCTTCAGTCCTGTGGATTACAAGTACTTGAAGAGTAAAAGGTTTAACAGGACAACCAAGCGTGGCTACTGGAAAACCACTGGGAATGACCGGAACGTTAAGATACCGGGCACCAACAATGTCATTGGGACTAAGAAGACCCTTGTTTTCCACGAAGGCCGTGTTCCCCGTGGTGTCAAGACCAACTGGGTTATTCATGAATACCATGCTGTTACCTCCCATGAAAGCCAGAGGGATTTTGTTTTATGCCGCTTGATGAAGAAAGCTGAGAAAAAAAATGAAGGGGGAATTGAGGCACCAACCTTTGATGAAGGGGAGCCCAGTGTACACTTGTTTTCTGACTATGGAAATCAGGTAGATATTATTCCCGGAGTAGATATGGAAGAAATCTTTCAGGCAGTGGATCGGGCCGAGAAATTCTCCCCCCCAGTACAACGGTCTCAAACTGGCATTGGGCTGGAAGATTTTTTCGCAAACTCTCCATTGTTTGATGCCCACTTTGGAAGCGAAAACATCAATATGCAAACTTCACTTGAAGTTACCGACGATGAAGAGTTGGTAAATTCATTTTGGGTTGATGATGAAGAATTTGTTATCAATGAAGAAAGAAGACACTGTTTTGTCAATAGTTCCACCCAACCAAAGTCATTTAGAAGGGTATACAATGAAAGCAGTGAAATAGATGCTGAAGTTGTCTCTAATCTGAATGAACACATTAGTGCTGATGAATACCCTGCACTGAAAATGTTTCAATCATCATATGATGTCCGTGGTGGCACAAGTCGTCTAGCTTCTAACCATAAAGCAAACAAAGAGAAAAAGGAGAGTATCATTCCAGATGATTTTTGGGCTGTGGAGACATCCTCTTGTGACTCAACTGCAGATGAACCAATTGAAATTTCTAGTTCTCCTTCCACTCCAACAAGAATGAAAAATCAGTGTCATCTAAGACCTGACAAGTTCATATTACAAAGAACTGTTGCAGGAAGACCTCAAATACAAAAGCAAGTTTCAAACAATGCAGTCTCCCATGTAGAGGTTCGGAAGGAATTGCTCACTGTGAAATCAGAAAAAGATCAGAAAAATGCTCAAAACGCTAGTTTAAGAGGGAACTTCAAAAACAAAAGCCAACAATCCTCTGATGTCAACAACAATGCTAATCTGTTTGGTGGTTCTTCAAAGCAGTATCTTAATATGCCTATGATGGCCTCCACTGAAAATGTTTTGATGCTGTTAAAAACATGCTGGTATGCGTGTCAGCACGCACTTTCTCCTTTCTTAGTTGCTACTTCTGCATCTCCCCTTCCCTTCTTTCATTCTTTGTCACAAAACTACAAAGTCACTGAGTTTAGTGCTTCGGCAAAACCAATGGATGATGATATTGTAGGACTCGGTTTTCGTCCAACAGAAGAAGAACTTGTGGACTTTTACCTCAAACACATGTTGCTCGGCAATGATCCCCGTGCCCACGTCATCCCTGTCATTGATCTTTGCGATGTGGAACCTTGGGATGTACCAGTGATGTTAGCAAAATCATCATCAACTATACGATTTGGTGACCCAGATTGGTTTTTCTTCAGCCCTGTTGATTTCAAGTATTCAAGAAGTAAAAGGTTTAACAGGACAACCAAGTGTGGCTTCTGGAAACCCACTGGAGTAGACCGTGAAGTTAGGACCTTTGAGACCAACACTCTAATTGGGACTAAGAAAACTCTTGTTTTCTATAAAGGCCGTGTTTCCCGCGGTGTCAAGTCCATCTGGGTTATTCACGAATATCACGCTGTTACCTTTCATGAGAGCCAGAGGACTTTTGTTTTATGTCGCTTGATGAAGAAACCTGGGAAAACAACTGAAGGCGGAACTGATGCACTCATCTGTGATGAAGGGGAGCCCAGTAGACACATGATTTCTGTCTATGGAAATCAGGAAAAAGCAGAAGGAATTCCATCTGGAAGTACTTGTATTGGAATGGAAACAATCCTTCAGGCAACCCCTCAGGCAGAGAAATACTTCTCTCCAATACACCAGAGTCAAACTGGTATTGAGGAAGAAGCATCTTTTTCAAGCTATCCATTTAACAATGCCTATTTTAGAAATGAAAACAACCCTATGCAGACTTCATTTGAAACTACAGAGGAAATGCAGACTTCATTTGAAATTACTGAGGAAGTTGAATTCCTAAACTCAATTTTAGTTGATGAGAGTTTTGTTATCGATAAAGAAAGTATGCATGTTTTTGTTAATAGCTCCACCCAATCAGAGTCATTGAGTGATACAGATGCAGAAGTTGTCTCTAAACTGGATGGCAATACTGTGGATATTTCAACAGTGTGCCATGAATATCCTAATTCAGATGAATACCATTCATCAAAAAGGTTTAAATCATCACATGATGTTGTCCATGGTGGCATATGTTTTCCATCTTCTAATCCTGAAGCAAAACAAGAAACAAAGGAAAGCATGTTTCAAGATGACTTGTGGGGATTGGAAACATCCTCTTGTGAGTCAACTGCAGACAAACCTTTGAAGATTAGTTGCATTGAAATTTCTAGTTCTCCTTCCACTTCATGGAGATGGGAAAATTAA 2799 0.4087 MENNIISICDHMPVGFRFRPTDEELVNYYLKHKLLADDFPVHIIPEIDLCKVEPWDVPERSVIKSDDPEWFFFSPVDYKYLKSKRFNRTTKRGYWKTTGNDRNVKIPGTNNVIGTKKTLVFHEGRVPRGVKTNWVIHEYHAVTSHESQRDFVLCRLMKKAEKKNEGGIEAPTFDEGEPSVHLFSDYGNQVDIIPGVDMEEIFQAVDRAEKFSPPVQRSQTGIGLEDFFANSPLFDAHFGSENINMQTSLEVTDDEELVNSFWVDDEEFVINEERRHCFVNSSTQPKSFRRVYNESSEIDAEVVSNLNEHISADEYPALKMFQSSYDVRGGTSRLASNHKANKEKKESIIPDDFWAVETSSCDSTADEPIEISSSPSTPTRMKNQCHLRPDKFILQRTVAGRPQIQKQVSNNAVSHVEVRKELLTVKSEKDQKNAQNASLRGNFKNKSQQSSDVNNNANLFGGSSKQYLNMPMMASTENVLMLLKTCWYACQHALSPFLVATSASPLPFFHSLSQNYKVTEFSASAKPMDDDIVGLGFRPTEEELVDFYLKHMLLGNDPRAHVIPVIDLCDVEPWDVPVMLAKSSSTIRFGDPDWFFFSPVDFKYSRSKRFNRTTKCGFWKPTGVDREVRTFETNTLIGTKKTLVFYKGRVSRGVKSIWVIHEYHAVTFHESQRTFVLCRLMKKPGKTTEGGTDALICDEGEPSRHMISVYGNQEKAEGIPSGSTCIGMETILQATPQAEKYFSPIHQSQTGIEEEASFSSYPFNNAYFRNENNPMQTSFETTEEMQTSFEITEEVEFLNSILVDESFVIDKESMHVFVNSSTQSESLSDTDAEVVSKLDGNTVDISTVCHEYPNSDEYHSSKRFKSSHDVVHGGICFPSSNPEAKQETKESMFQDDLWGLETSSCESTADKPLKISCIEISSSPSTSWRWEN* 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0427 932 MobiDBLite consensus disorder prediction 427 456 - -
Gso7g0427 932 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 533 902 - -
Gso7g0427 932 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 9 450 - -
Gso7g0427 932 Gene3D NAC domain 540 687 IPR036093 GO:0003677|GO:0006355
Gso7g0427 932 Gene3D NAC domain 21 164 IPR036093 GO:0003677|GO:0006355
Gso7g0427 932 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 9 450 - -
Gso7g0427 932 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 533 902 - -
Gso7g0427 932 SUPERFAMILY NAC domain 530 683 IPR036093 GO:0003677|GO:0006355
Gso7g0427 932 ProSiteProfiles NAC domain profile. 531 683 IPR003441 GO:0003677|GO:0006355
Gso7g0427 932 ProSiteProfiles NAC domain profile. 12 159 IPR003441 GO:0003677|GO:0006355
Gso7g0427 932 Pfam No apical meristem (NAM) protein 13 140 IPR003441 GO:0003677|GO:0006355
Gso7g0427 932 Pfam No apical meristem (NAM) protein 534 664 IPR003441 GO:0003677|GO:0006355
Gso7g0427 932 SUPERFAMILY NAC domain 10 159 IPR036093 GO:0003677|GO:0006355
Gso7g0427 932 MobiDBLite consensus disorder prediction 429 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0427 Gso-Chr7 4013550 4026854 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0427 528 683 NAC Transcription Factor Family AT3G49530 44.099 3.84e-38 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso7g0427 NAM 1.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0427 - - gsj:114419327 1869.74