Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0420 ATGACCAACCATCACCTCAAACACTCCATTCTATCCTCAGTTTTTCTCATGCCATCACCATCTTCATCTTCCTTTGCATATTCCCTTTACATGGTTTCCAAGTTAATGGTCACTATCATAGTACCCTTATTCCTTTTGTCCTTGTTTGTTGTTCAAGTCTCCTCTTGTAACCAGATTGATAAACTCTCCCTCTTGGCCTTCTCTGGGAACATATCCACCTCTCCACCTTATCCTTCTCTCAATTGGTCTGATTCTCTTGATTGTTGTAGTTGGGAAGGCATTACTTGTGATGGAGATCTTAGAGTCACACACCTTTTGCTACCATCTAGAGGTCTCACTGGCTTCATCTCCCCCTCTCTCACAAACCTCTCTTCTCTCTCTCAACTTAATCTCTCCCATAATAGATTGTCTGGTACTCTCCAACACCACTTTTTCTCATTGCTCAATCACTTGCTGGTTCTTGATTTGAGCTACAACCGTCTCTCTGGTGAATTGCCACCTTTTGTTGGTGATATCAGTGGCAAAAATAGTAGTGGTGGTGTTATTCAGGAGCTGGATTTGTCTAGTAACCTCTTCAATGGGACACTTCCAAATTCTTTGCTTGAGCACTTGGCAGCTGCAGCAGCTGGAGGGAGTTTTGTGTCTTTGAATGTTAGTAATAACAGCCTCACAGGTCATATTCCCACTTCTCTCTTTTGCGTGAATGACCATAACTCATCCTCTCTCAGATTCTTGGATTATTCCTCCAATGAATTTGATGGTGCCATTCAGCCTGGACTAGGAGCATGTTCCAAGTTGGAGAAGTTTAAAGCAGGTTTCAATTTTCTGTCAGGGCCTATCCCAAGTGATCTTTTTGATGCTGTTTCTCTCACAGAAATCTCATTGCCCCTTAATAGACTCACTGGAACAATTGCTGATGGCATTGTTGGCCTTACCAACCTCACAGTTTTGGAGCTCTACTCCAATCATTTCACAGGTTCAATCCCCCATGATATTGGTGAACTCTCCAAGTTGGAACGGCTACTCCTTCATGTCAACAATTTGACAGGTACTATGCCCCCATCTCTGATTAACTGTGTCAATCTTGTGGTGTTGAATTTAAGGGTCAACCTCTTGGAGGGAAATCTCTCTGCATTCAATTTCTCAAGATTCCTCGGACTTACCACACTTGACCTTGGCAACAATCATTTTACTGGTGTTTTACCACCAACCCTTTATGCATGCAAGTCACTTTCAGCTGTGAGGCTAGCATCTAATAAGCTTGAGGGAGAGATTTCACCCAAGATACTTGAACTAGAGTCTCTGTCTTTCCTATCAATTTCTACTAACAAGTTGAGGAATGTCACTGGGGCTCTTAGAATACTCAGGGGGCTCAAGAACCTTAGTACCCTTATGCTCTCCATGAATTTTTTCAATGAAATGATACCACAAGATGTTAACATAATAGAGCCAGATGGATTCCAAAAACTCCAGGTTTTAGGCTTTGGTGGTTGTAATTTCACAGGTCAAATACCAGGTTGGCTTGTAAAACTGAAGAAGCTTGAGGCCTTGGACCTGTCCTTTAATCAAATTAGTGGTCCAATTCCTCTTTGGTTGGGTACACTTCCTCAGCTTTTCTACATGGACTTGTCTGTTAACCTCCTTACAGGAGTATTTCCGGTAGAGCTCACAGAACTCCCAGCACTGGCATCTCAACAGGCAAATGATAAAGTAGAAAGGACTTACTTTGAGTTACCTGTCTTTGCTAATGCAAACAATGTTTCCCTACTGCAATATAATCAGCTTTCAGGCCTACCTCCAGCAATATATCTCGGAAGCAATCACCTTAATGGAAGTATCCCTATTGAGATTGGGAAACTCAAAGTCCTTCATCAGCTGGATCTGAAAAAGAACAACTTCTCTGGCAATATACCAGTTCAGTTTTCAAACTTGACTAACTTAGAGAAACTAGACCTCTCAGGAAACCAACTATCTGGGGAAATTCCTGATTCCCTCAGAAGATTACATTTCTTGTCTTTTTTCAGTGTAGCATTCAATAATCTTCAAGGACAGATACCCACTGGTGGTCAATTTGATACTTTCTCCAACTCCAGCTTTGAAGGAAATGTGCAATTGTGCGGTTTGGTTATTCAGCGCTCTTGTCCTTCTCAACAAAATACTAATACTACTGCAGCTAGTCGCAGCTCAAACAAAAAAGTACTGCTTGTACTCATCATTGGAGTCAGTTTTGGCTTTGCATTCCTGATAGGAGTGTTGACACTGTGGATACTCTCCAAGAGGAGGGTCAATCCAGGAGGAGTGTCTGACAAGATTGAAATGGAATCAATTTCTGCCTATTCCAACAGTGGAGTTCATCCTGAGGTTGACAAGGAGGCTAGCTTAGTGGTATTGTTTCCCAACAAGAATAATGAAACCAAGGACCTTACCATATTTGAGATCCTAAAATCCACTGAAAATTTCAGTCAGGCAAACATTATAGGATGTGGGGGTTTTGGTTTGGTTTACAAAGCAACATTACCAAATGGAACTACACTGGCCATCAAGAAACTTTCAGGAGACTTGGGCCTCATGGAAAGGGAATTCAAAGCAGAAGTAGAGGCTTTGTCAACTGCACAACATGAGAATCTGGTGGCATTACAAGGCTATGGTGTGCATGATGGATTCCGGCTTCTCATGTATAATTACATGGAAAATGGAAGCCTGGATTACTGGTTGCATGAAAAGCCTGATGGTGCATCTCAACTTGATTGGCCAACTCGCTTGAAGATTGCACAAGGTGCAAGCTGTGGTTTGGCTTATTTGCATCAGATATGCGAACCACACATTGTGCATCGCGATATCAAGTCGAGCAATATACTCCTTAATGAAAAATTTGAGGCACATGTTGCTGATTTTGGGTTGTCCAGATTGATTCTTCCATATCATACTCATGTTACAACTGAACTTGTAGGTACATTAGGCTACATACCCCCAGAGTATGGACAAGCATGGGTGGCTACTTTGAGAGGAGATGTGTACAGCTTTGGGGTTGTCATGCTTGAGCTGCTCACTGGGAGGAGGCCTGTAGATGTATGCAAGCCAAAAATGTCAAGGGAGTTGGTTAGCTGGGTTCAACAGATGAGGATTGAAGGAAAACAAGATCAAGTATTTGACCCTCTTCTAAGAGGAAAGGGGTTTGAAGGACAGATGCTGAAGGTACTGGATGTGGCTTCCGTGTGTGTTAGCCACAATCCTTTCAAGAGACCAAGCATCAGAGAAGTTGTTGAATGGCTGAAGAATGTTGGATCAGACAACCAGCCAACACAGAAATAA 3312 0.4236 MTNHHLKHSILSSVFLMPSPSSSSFAYSLYMVSKLMVTIIVPLFLLSLFVVQVSSCNQIDKLSLLAFSGNISTSPPYPSLNWSDSLDCCSWEGITCDGDLRVTHLLLPSRGLTGFISPSLTNLSSLSQLNLSHNRLSGTLQHHFFSLLNHLLVLDLSYNRLSGELPPFVGDISGKNSSGGVIQELDLSSNLFNGTLPNSLLEHLAAAAAGGSFVSLNVSNNSLTGHIPTSLFCVNDHNSSSLRFLDYSSNEFDGAIQPGLGACSKLEKFKAGFNFLSGPIPSDLFDAVSLTEISLPLNRLTGTIADGIVGLTNLTVLELYSNHFTGSIPHDIGELSKLERLLLHVNNLTGTMPPSLINCVNLVVLNLRVNLLEGNLSAFNFSRFLGLTTLDLGNNHFTGVLPPTLYACKSLSAVRLASNKLEGEISPKILELESLSFLSISTNKLRNVTGALRILRGLKNLSTLMLSMNFFNEMIPQDVNIIEPDGFQKLQVLGFGGCNFTGQIPGWLVKLKKLEALDLSFNQISGPIPLWLGTLPQLFYMDLSVNLLTGVFPVELTELPALASQQANDKVERTYFELPVFANANNVSLLQYNQLSGLPPAIYLGSNHLNGSIPIEIGKLKVLHQLDLKKNNFSGNIPVQFSNLTNLEKLDLSGNQLSGEIPDSLRRLHFLSFFSVAFNNLQGQIPTGGQFDTFSNSSFEGNVQLCGLVIQRSCPSQQNTNTTAASRSSNKKVLLVLIIGVSFGFAFLIGVLTLWILSKRRVNPGGVSDKIEMESISAYSNSGVHPEVDKEASLVVLFPNKNNETKDLTIFEILKSTENFSQANIIGCGGFGLVYKATLPNGTTLAIKKLSGDLGLMEREFKAEVEALSTAQHENLVALQGYGVHDGFRLLMYNYMENGSLDYWLHEKPDGASQLDWPTRLKIAQGASCGLAYLHQICEPHIVHRDIKSSNILLNEKFEAHVADFGLSRLILPYHTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGRRPVDVCKPKMSRELVSWVQQMRIEGKQDQVFDPLLRGKGFEGQMLKVLDVASVCVSHNPFKRPSIREVVEWLKNVGSDNQPTQK* 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0420 1103 Pfam Leucine Rich Repeat 646 667 IPR001611 GO:0005515
Gso7g0420 1103 Gene3D Phosphorylase Kinase; domain 1 783 895 - -
Gso7g0420 1103 Gene3D Ribonuclease Inhibitor 286 380 IPR032675 -
Gso7g0420 1103 Gene3D Ribonuclease Inhibitor 57 206 IPR032675 -
Gso7g0420 1103 SUPERFAMILY L domain-like 85 233 - -
Gso7g0420 1103 ProSiteProfiles Leucine-rich repeat profile. 646 668 IPR001611 GO:0005515
Gso7g0420 1103 Pfam Leucine rich repeat N-terminal domain 60 97 IPR013210 -
Gso7g0420 1103 Pfam Protein kinase domain 821 1089 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0420 1103 SMART serkin_6 820 1091 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0420 1103 PANTHER OS06G0692500 PROTEIN 37 1095 - -
Gso7g0420 1103 ProSitePatterns Serine/Threonine protein kinases active-site signature. 942 954 IPR008271 GO:0004672|GO:0006468
Gso7g0420 1103 Gene3D Ribonuclease Inhibitor 381 723 IPR032675 -
Gso7g0420 1103 PANTHER LEUCINE RICH REPEAT KINASE 2 37 1095 - -
Gso7g0420 1103 SUPERFAMILY Protein kinase-like (PK-like) 806 1091 IPR011009 -
Gso7g0420 1103 ProSitePatterns Protein kinases ATP-binding region signature. 826 849 IPR017441 GO:0005524
Gso7g0420 1103 Gene3D Transferase(Phosphotransferase) domain 1 896 1103 - -
Gso7g0420 1103 ProSiteProfiles Protein kinase domain profile. 820 1091 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0420 1103 SUPERFAMILY L domain-like 590 706 - -
Gso7g0420 1103 Gene3D Ribonuclease Inhibitor 207 285 IPR032675 -
Gso7g0420 1103 SMART LRR_typ_2 644 668 IPR003591 -
Gso7g0420 1103 SMART LRR_typ_2 384 408 IPR003591 -
Gso7g0420 1103 SMART LRR_typ_2 148 172 IPR003591 -
Gso7g0420 1103 SMART LRR_typ_2 511 535 IPR003591 -
Gso7g0420 1103 SMART LRR_typ_2 123 147 IPR003591 -
Gso7g0420 1103 SMART LRR_typ_2 311 335 IPR003591 -
Gso7g0420 1103 SMART LRR_typ_2 432 454 IPR003591 -
Gso7g0420 1103 PRINTS Leucine-rich repeat signature 126 139 - -
Gso7g0420 1103 PRINTS Leucine-rich repeat signature 644 657 - -
Gso7g0420 1103 SUPERFAMILY L domain-like 215 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0420 Gso-Chr7 3953592 3957375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0420 26 760 Miscellaneous Gene Families AT1G17250 51.340 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Gso7g0420 Pkinase 7.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0420 - - gmx:100781943 2063.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0420 7 3953592 3957375 Gso7g0420 7 3953592 3957375 ECH