Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0416 ATGGTGTTGGATCCAAGACTGGTGCTGGTGCTGTTCATCGGCACTTGCATTTTGGCCATCAATGGTGACACAGATCCAAATGACGTTGCTTCTCTAAAGGTTTTGTTTCAAAGTATGAACTCACCATCCCAGCTAAATTGGAATGGTGATGATCCTTGTGGACAGTCGTGGCAAGGCATCACTTGCTCTGGCAATCGAGTCACAGAGATTAAGTTACCTGGTCGTTCACTTTCTGGATCTTTGGGTTACCAGCTAGAACCCATGTCATCTGTGACAAACCTAGACTTGAGTAACAACAACCTTGGTGGCACCATACCATACCAACTTCCTCCTAATCTGCAGTACTTAAATCTTGCTAATAATAATTTCAATGGGGCAATCCCCTATTCCCTTTCTGAAAAGACTTCGCTTATAGTCCTGAATCTTGGTCACAATCAGCTCCAGCAAGCACTTAATGTTGATTTCCAAAAGCTTTCTTCCCTCTCTACATTGGATCTCTCCTTCAATTCTTTGACGGGTGACCTGCCTCAGACTATGAGCTCACTTTCTAGCATAAGAACCATGTATCTGCAAAACAACCAGCTTACTGGCACCATTGATGTCCTTGCTAATCTGCCTCTTGATACTTTGAATGTGGGAAACAATCATTTTACAGGCTGGATACCAGAACAATTGAAAAACATAATACAAAAGGATGGTAATGCATGGAGCTCGGGACCTGCACCCCCACCTCCTCCTGGGACACCTCCAGCAGTAGCAAGAAACCGAAATCACAAATCTGGTGGACATAGCCCATCAGATGGTGGCTCAAGTGACGGTGGAGGCAAAAAATCTGGTATAGGAGGTGGTGGAATTGCTGGAATAGTGATCTCCATCTTGGTTGTTGGGGCAATAGTAGTATTCTTTCTGGTGAAGAGAAGACCCAAAAAGTCATTTAATGATGTTGAAAAGCTTGACAATCAACCCTTGGCTCAAAACGAAGTGCACGAAATGAATTCCATGCAAACTTCATCTGTAATTGATTTGAAGACATTTGATACATCTGCGACCCCAATAAGCCTTAAACCTCCACCTTTTGATCGTCACAAATCATTTGATGAAGACGAGTTTTCAAACAAGCCCGTTATAGTCAATAAGCCCACTAAAGTCAAGAAGACCGTAACAGCTCCTACAAATGTAAAATCGTATTCTATAGCTGACCTGCAGATTGCTACTGGATCCTTCAGTGTGGAGCAACTTCTTGGTGAGGGGTCTTTTGGACGTGTATACCGTGCTCAATTTGATGAGGGAAAGGTTCTTGCCGTGAAGAAGATAGATTCATCTGTCCTTCCCAATGATATGTCTGACGATTTTGTAGAACTAGTTTCAAACATATCCCAATTGCATCATCCCAATGTGACCGAGCTTGTAGGTTATTGTTCAGAGCATGGACAACACCTACTAGTCTATGAGTTTCATAAAAATGGATCACTTCATGACTTCCTTCACCTACCTGATGAGTATAGTAAACCATTGATATGGAATTCTCGTGTGAAGATTGCTTTGGGGATTGCTCGTGCTTTAGAGTACCTACATGAAGTTTGTTCACCATCTGTTGTTCATAAGAATATAAAGTCGGCCAACATATTGCTTGATACAGATTTTAATCCTCATCTTTCCGACAGTGGATTGGCAAGCTATATTCCAAATGCAAACCAGGTATTGAACAATAATGCTGGATCTGGATATGAAGCTCCCGAAGTTGGCTTGTCTGGTCATTATACTCTTAAGAGTGATGTTTATAGCTTTGGAGTTGTCATGTTGGAACTTCTTAGTGGACGGAAACCATTTGATAGCTCAAGGCCGAGGTCTGAGCAGGCTTTGGTTCGATGGGCAACACCTCAACTCCACGATATCGATGCCCTGGCTAAAATGGTTGATCCTACATTGGAAGGATTATACCCTGTGAAGTCCCTTTCTCGATTTGCGGATGTTATTGCTCTGTGTGTTCAGCCGGAGCCGGAATTCCGACCACCTATGTCAGAAGTGGTTCAAGCGCTGGTTCGGTTAGTGCAGCGTACTAACATGAGCAAGAGGACGTTTGGAACTGATCAAGGAGGATCCAACAGAGGGGGTGATGACCAAGATACACAAGACATGTAA 2142 0.4318 MVLDPRLVLVLFIGTCILAINGDTDPNDVASLKVLFQSMNSPSQLNWNGDDPCGQSWQGITCSGNRVTEIKLPGRSLSGSLGYQLEPMSSVTNLDLSNNNLGGTIPYQLPPNLQYLNLANNNFNGAIPYSLSEKTSLIVLNLGHNQLQQALNVDFQKLSSLSTLDLSFNSLTGDLPQTMSSLSSIRTMYLQNNQLTGTIDVLANLPLDTLNVGNNHFTGWIPEQLKNIIQKDGNAWSSGPAPPPPPGTPPAVARNRNHKSGGHSPSDGGSSDGGGKKSGIGGGGIAGIVISILVVGAIVVFFLVKRRPKKSFNDVEKLDNQPLAQNEVHEMNSMQTSSVIDLKTFDTSATPISLKPPPFDRHKSFDEDEFSNKPVIVNKPTKVKKTVTAPTNVKSYSIADLQIATGSFSVEQLLGEGSFGRVYRAQFDEGKVLAVKKIDSSVLPNDMSDDFVELVSNISQLHHPNVTELVGYCSEHGQHLLVYEFHKNGSLHDFLHLPDEYSKPLIWNSRVKIALGIARALEYLHEVCSPSVVHKNIKSANILLDTDFNPHLSDSGLASYIPNANQVLNNNAGSGYEAPEVGLSGHYTLKSDVYSFGVVMLELLSGRKPFDSSRPRSEQALVRWATPQLHDIDALAKMVDPTLEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRTNMSKRTFGTDQGGSNRGGDDQDTQDM* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0416 713 SUPERFAMILY L domain-like 27 228 - -
Gso7g0416 713 Pfam Leucine rich repeat 111 171 IPR001611 GO:0005515
Gso7g0416 713 SUPERFAMILY Protein kinase-like (PK-like) 384 680 IPR011009 -
Gso7g0416 713 MobiDBLite consensus disorder prediction 691 706 - -
Gso7g0416 713 Gene3D Ribonuclease Inhibitor 136 237 IPR032675 -
Gso7g0416 713 Gene3D Phosphorylase Kinase; domain 1 371 485 - -
Gso7g0416 713 Gene3D Ribonuclease Inhibitor 28 135 IPR032675 -
Gso7g0416 713 PANTHER OS01G0253100 PROTEIN 14 710 IPR045271 GO:0004714|GO:0006468
Gso7g0416 713 ProSitePatterns Protein kinases ATP-binding region signature. 414 437 IPR017441 GO:0005524
Gso7g0416 713 MobiDBLite consensus disorder prediction 691 713 - -
Gso7g0416 713 Pfam Protein tyrosine and serine/threonine kinase 410 680 IPR001245 GO:0004672|GO:0006468
Gso7g0416 713 Gene3D Transferase(Phosphotransferase) domain 1 487 701 - -
Gso7g0416 713 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Gso7g0416 713 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 14 710 - -
Gso7g0416 713 MobiDBLite consensus disorder prediction 232 277 - -
Gso7g0416 713 ProSiteProfiles Protein kinase domain profile. 408 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0416 713 PRINTS Leucine-rich repeat signature 91 104 - -
Gso7g0416 713 PRINTS Leucine-rich repeat signature 158 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0416 Gso-Chr7 3907934 3915774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0416 7 712 Strubbelig Receptor Gene Family AT1G53730 65.369 0.0 857
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Gso7g0416 PK_Tyr_Ser-Thr 4.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0416 - - gmx:100780323 1315.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0416 7 3907934 3915774 Gso7g0416 7 3907934 3915774 ECH