Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso7g0412 | ATGAGTGCAAGTGACAACGCATGGGGTGAATCTGACACAATTGAGATCACAGGAAAGATCATGGTGGTGGCCATAATATTCCTCTTCATGGTGGTTGTCTTTGTTCTTGTGCTCCATCTCTATGCAAAATGGTTCTGGTGGAGCATGGAGGAAAACGCCACTCCCCAGCCCCGCCACCGCCGCCGCCGCCGCCGGAGGTTTGTCTTCGCCCCCGGTCAAGACTCGGTGATCTATGAGACTCACCAGGTTGGGCTTGACCCTTCAGTTCTCAAGTCCTTGCCAGTGTTGGTTTTCCAACCTGAGGACTTCAAAGAAGGTTTGGAGTGTGCAGTTTGCCTCTCTGAGATTGTCCAAGGTGAAAAGTTGAGGCTTTTGCCCAAATGCAATCATGGGTTTCATGTGGATTGCATTGACATGTGGTTCCATTCACACTCCACTTGTCCTCTTTGTAGGAACCCTGTTGCTTTTGAATCCTCTAAATGTGAAGAGAGTAATGTCTCAGGGAATAGTGATTCATCATCATCATCATATGAAGAGAACTCAGGTGGTGTGAGTGGTTTGGAACCTTCAAATTTTCCCACAAATGTGTTGGTTTGGGGGAACCAGACACAAGTTAGTTCCATTGGGGTTTCATTGGAAGAAAAAGAAGAAGAAGAAGAAGAAGGTACTTCTCAGTCCCAGCAACCACCTTGTTCTACACCACCTACAGCATCTTCTTCTGCTAGTAGCAATGTTAATGGAAGGTGTCATGGAATGTTGGTGATTGATATTCCAAGTGAGTGCACTTCCTCCTCTTTGTCACCTTCTGGGAGTAGGTGTGCTGAAGAGGAGGTGAAATCACCAATGGCTGCCACATTGAGGTCATTCAAGAGGCTTTTGAGCAGGGACAAAAAGTTGAGTCCTTGCAGTCCAAGTTCTGTAGACGTGGAACAAGCACAGAGCTAG | 945 | 0.4709 | MSASDNAWGESDTIEITGKIMVVAIIFLFMVVVFVLVLHLYAKWFWWSMEENATPQPRHRRRRRRRFVFAPGQDSVIYETHQVGLDPSVLKSLPVLVFQPEDFKEGLECAVCLSEIVQGEKLRLLPKCNHGFHVDCIDMWFHSHSTCPLCRNPVAFESSKCEESNVSGNSDSSSSSYEENSGGVSGLEPSNFPTNVLVWGNQTQVSSIGVSLEEKEEEEEEGTSQSQQPPCSTPPTASSSASSNVNGRCHGMLVIDIPSECTSSSLSPSGSRCAEEEVKSPMAATLRSFKRLLSRDKKLSPCSPSSVDVEQAQS* | 315 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso7g0412 | 314 | Pfam | Ring finger domain | 108 | 151 | IPR001841 | - | |
Gso7g0412 | 314 | SUPERFAMILY | RING/U-box | 89 | 157 | - | - | |
Gso7g0412 | 314 | PANTHER | RING-H2 FINGER PROTEIN ATL3 | 3 | 311 | - | - | |
Gso7g0412 | 314 | ProSiteProfiles | Zinc finger RING-type profile. | 109 | 151 | IPR001841 | - | |
Gso7g0412 | 314 | MobiDBLite | consensus disorder prediction | 260 | 281 | - | - | |
Gso7g0412 | 314 | MobiDBLite | consensus disorder prediction | 208 | 245 | - | - | |
Gso7g0412 | 314 | MobiDBLite | consensus disorder prediction | 224 | 245 | - | - | |
Gso7g0412 | 314 | CDD | RING-H2_EL5_like | 108 | 151 | - | - | |
Gso7g0412 | 314 | MobiDBLite | consensus disorder prediction | 162 | 186 | - | - | |
Gso7g0412 | 314 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 3 | 311 | IPR044675 | - | |
Gso7g0412 | 314 | SMART | ring_2 | 109 | 150 | IPR001841 | - | |
Gso7g0412 | 314 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 86 | 160 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso7g0412 | Gso-Chr7 | 3883350 | 3885066 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso7g0412 | 15 | 297 | C3H Transcription Factor Family | AT1G53820 | 42.345 | 3.36e-63 | 201 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso7g0412 | - | - | gmx:100775523 | 516.538 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso7g0412 | 7 | 3883350 | 3885066 | Gso7g0412 | 7 | 3883350 | 3885066 | ECH | |
Gso7g0412 | 7 | 3883350 | 3885066 | Gso16g0118 | 16 | 1281471 | 1283077 | GST |