Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0407 ATGGATACAATCAAGTCCTTCAAGGGCTACGGCAAAGTAGACGAGTTGGAGCAGCAAGCCTATCAGAAGAAGACACGTAAGCGCCTCATAATCATCGCAGGCTCTTCCATCGTTCTATTTGCGGTGATCATCGCTGCGGTCGCAGGGGTTGTGATACACAAGCGCAACACCTCATCATCGCCCTCCTCTGACTCGCCCCCGCAAACTGAGTTAACCCCGGCCGCGTCACTCAAAGCGGTTTGCCACGTGACTCAGTACCCTAACTCGTGCTTCTCCGCAATCTCCTCGTTACCGGAATCCAACACCACTGATCCGGAGCTCCTCTTCAAGCTCTCTCTCCGCGTCGCCATTGACGAGCTCTCGAAGCTCTCGAGCTTTCCTTCGAAGCTCCGCGCCAATGCGGAACACGACGCGCGTCTCCAGAAGGCGATCGATGTCTGCGGGAACGTCTTCGGCGACGCGCTGGAACGGCTCAACGACTCGATCTCCGCGCTCGGAAGCGGCGCCGCTGAGGCCGGAAAGATTATCTCTCCGGCGAGTGTTGGCGACGTGGAGACGTGGATCAGCGCCGCGCTCACGGACCAGGACACGTGCCTCGACGCGCTCGCCGAGCTGAACTCCACCGCCTCGCGCGGCGCGCTGCGCGAGATCGAAACCGCGATGAGGAACTCCACGGAGTTCGCGAGCAACAGTTTGGCCATTGTCACGAAGATCCTAGGGTTGCTTTCGAAGTTCGATTCACCGATTCACCACCGGCGGCTGCTAGGGTTTCCGGAGTGGCTCGGCGCGGCGGAGCGGAGGCTGCTTCAGGTGAACAGCAGCGAAACGACGCCGGACGCTGTGGTGGCGAGTGACGGTAGCGGACAGTTCAGGACGATCGGTGAGGCGCTGAGATTGGTGAAGAAGAAGAGCGAGAAGAGGTTCGTGGTGCACGTGAAGGAAGGGCGTTACGTTGAGAACATCGATTTGGATAAGAATACGTGGAATGTGTTTATCTTCGGTGACGGCAAGGAGAAAACCGTCGTCGTTGGTAGCCGGAACTTCATGGACGGCACGCCGACTTTCGAAACCGCCACCTTCGCTGTGAAAGGCAAGGGATTCATTGCCAAAGACATAGGATTCGTGAACAATGCAGGTGCATCTAAGCACCAGGCTGTGGCATTGAGATCTGGCTCGGATCGTTCTGTGTTCTTTAGATGCTCATTTGATGGCTTCCAAGATACCCTCTATGCCCATTCCAACCGCCAGTTCTACCGTGACTGTGACATTACAGGCACCATAGACTTCATATTCGGCAATGCAGCTGCTGTGTTCCAAAACTGCAAAATAATGCCTAGACAGCCTCTACCAAACCAGTTCAACACCATCACAGCTCAGGGCAAGAAGGACCCCAACCAGAACACCGGAATCATAATCCAGAAATCAAAATTCATTCCCCTTGGAAACAATCTCACAGCTCCCACATACCTTGGTAGGCCATGGAAAGATTTCTCCACCACTGTGATCATGCAATCTGATATTGGGTCATTCTTGAAGCCAGTGGGGTGGATTAGTTGGGTCTCCAATGTGGAACCTGTAAGTACAATCTTCTATGCTGAATACCAGAATACTGGGCCTGGAGCTGACGTGTCCCAGAGGGTCAAATGGGCTGGTTATAAGCCCACTCTCACGGACGTGGAGGCAGACAAGTTCACTGTGCAGTCCTTTATCCAAGGCCCTGAGTGGTTGCCAAATGCTGCTGTGGAGTTTGATTCCACCTTGTGA 1764 0.5459 MDTIKSFKGYGKVDELEQQAYQKKTRKRLIIIAGSSIVLFAVIIAAVAGVVIHKRNTSSSPSSDSPPQTELTPAASLKAVCHVTQYPNSCFSAISSLPESNTTDPELLFKLSLRVAIDELSKLSSFPSKLRANAEHDARLQKAIDVCGNVFGDALERLNDSISALGSGAAEAGKIISPASVGDVETWISAALTDQDTCLDALAELNSTASRGALREIETAMRNSTEFASNSLAIVTKILGLLSKFDSPIHHRRLLGFPEWLGAAERRLLQVNSSETTPDAVVASDGSGQFRTIGEALRLVKKKSEKRFVVHVKEGRYVENIDLDKNTWNVFIFGDGKEKTVVVGSRNFMDGTPTFETATFAVKGKGFIAKDIGFVNNAGASKHQAVALRSGSDRSVFFRCSFDGFQDTLYAHSNRQFYRDCDITGTIDFIFGNAAAVFQNCKIMPRQPLPNQFNTITAQGKKDPNQNTGIIIQKSKFIPLGNNLTAPTYLGRPWKDFSTTVIMQSDIGSFLKPVGWISWVSNVEPVSTIFYAEYQNTGPGADVSQRVKWAGYKPTLTDVEADKFTVQSFIQGPEWLPNAAVEFDSTL* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0407 587 PANTHER PECTINESTERASE 1-RELATED 8 584 - -
Gso7g0407 587 Pfam Plant invertase/pectin methylesterase inhibitor 77 234 IPR006501 GO:0004857
Gso7g0407 587 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 239 IPR035513 -
Gso7g0407 587 PANTHER PECTINESTERASE 8 584 - -
Gso7g0407 587 TIGRFAM PME_inhib: pectinesterase inhibitor domain 63 238 IPR006501 GO:0004857
Gso7g0407 587 Gene3D - 273 587 IPR012334 -
Gso7g0407 587 SUPERFAMILY Pectin lyase-like 277 584 IPR011050 -
Gso7g0407 587 ProSitePatterns Pectinesterase signature 2. 423 432 IPR033131 -
Gso7g0407 587 ProSitePatterns Pectinesterase signature 1. 304 323 IPR018040 -
Gso7g0407 587 SMART PMEI_2 72 234 IPR006501 GO:0004857
Gso7g0407 587 CDD PMEI-like_3 79 238 - -
Gso7g0407 587 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 77 239 IPR035513 -
Gso7g0407 587 Pfam Pectinesterase 279 572 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0407 Gso-Chr7 3831782 3834871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0407 1 581 Carbohydrate Esterase AT1G53840 58.249 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0407 - - gmx:100777128 1139.41