Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0400 ATGGAGAATCAGAAGGCATCGGCGTATTACGAGAACAGAGCGGTTCAGTTCGGGGTAGTGAGCACCGACTGGCTCGCTCAGGCCCAGTCCGCCACCGTCCATTCTCCTCCTCACAACAACGATGACGACGAAGAGATACCGTTCTCGGTGATATCGGAGTTCGACAGGTGGCGCAAACACCCCGATTTGGCGGAGGCCGTGGCCGCCATTCGCGCCTTGGCCGCCGTCATCCGCTCCAGCAAGGCCTCCACCATGATGCAGCTCGAAATCCAACTCAAAAACGCCTCCGATACCCTCAAATGCTGGGATACAACCTCCATCTCTCTAACCGCCGCCTGCGATCTCTTCATGCGATACGTCACCAGAACTTCCGCTTTGGAGTACGAAGACTTCAATTCCGCCAAGTCTCGCTTGCTCGAACGCGCCGAAAAGTTCGGTGAAATCTCCTTCAAGGCTCGCAAGATCATTGCAATGCTCAGTCAAGATTTTATATTCGACGGCTGCACGATTCTCGTTCACGGATTCTCCCGAGTCGTGCTTCAGATTCTCAAACTCGCCGCGCAGAATAACAAGCTCTTTCGCGTCTTCTGCACAGAGGGGAGACCAGATCGAACGGGTTTGCGGTTGTCAAATGAGCTGGCCAAGCTTGATGTTCCGGTGAAGCTTGTTATAGACTCTGCGGTGGCGTATACCATGGATGAGGTTGACATGGTGTTTGTTGGGGCGGATGGAGTTGTTGAAAGTGGTGGCATAATCAACATGATGGGGACTTACCAAATCTCATTGGTTGCTAAGAGTATGAGCAAGCCTGTTTATGTGGCTGCTGAAAGCTACAAGTTTGCTCGACTTTACCCTCTGGACCAAAAGGATTTGGCTCCTGCCTTGCGACCAGTTGATTTTGGTGTGCCTATTCCATCCAAGGTTGAGGTTGAATGTTCTGCGCGGGATTATACTCCTCCTCAATATCTCACTCTGCTTTTCACAGATTTAGGTGTTCTTACTCCATCAGTTGTTAGTGATGAACTCATCCAGCTATACTTGTAG 1044 0.5115 MENQKASAYYENRAVQFGVVSTDWLAQAQSATVHSPPHNNDDDEEIPFSVISEFDRWRKHPDLAEAVAAIRALAAVIRSSKASTMMQLEIQLKNASDTLKCWDTTSISLTAACDLFMRYVTRTSALEYEDFNSAKSRLLERAEKFGEISFKARKIIAMLSQDFIFDGCTILVHGFSRVVLQILKLAAQNNKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLVIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQISLVAKSMSKPVYVAAESYKFARLYPLDQKDLAPALRPVDFGVPIPSKVEVECSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0400 347 SUPERFAMILY NagB/RpiA/CoA transferase-like 63 346 IPR037171 -
Gso7g0400 347 Gene3D - 151 347 IPR042529 -
Gso7g0400 347 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 6 347 - -
Gso7g0400 347 Gene3D - 47 148 IPR042528 -
Gso7g0400 347 Pfam Initiation factor 2 subunit family 61 335 IPR000649 GO:0044237
Gso7g0400 347 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 6 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0400 Gso-Chr7 3776539 3779033 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0400 7 347 Eukaryotic Initiation Factors Gene Family AT1G53880 80.814 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0400 K03239 - gmx:102669842 669.848