LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso7g0392	ATGCAGTGTGATGTTTTCCCTTTAAATTTAGGTAACAGCATAGCAAAGCAATACTTGTCCCTGAGAATGGCTCCTCCATATCCCTCCCTGCTCATTCTCCTATTTTTGTTGACAAGCCAAGTTACTTGTTATAGTTCAGAGAAGGAAAAGAGTAAAACTTTCATAATCCAAGTCCAGCACGAAGCCAAGCCTTCCATATTCCCAACCCACAAACACTGGTACGACTCCTCCCTCTCTTCCATCTCCACCACCGCTTCTGTTATCCACACCTACCACACCGTTTTCCACGGCTTCTCCGCAAAGCTCTCACCTTCCGAGGCACAGAAGCTTCAATCTCTCGCCCACGTCATCACTCTCATACCCGAACAGCTTCGCTCGCCTCACACCACCCGCTCCCCTGAGTTTCTCGGCTTAACCACCGCCGACAGAACCGGGTTGCTCCACGAGACCGATTTCGGCTCCGATCTCGTCATCGGAGTCATCGACACCGGAATCTGGCCGGAGCGACAGAGCTTCAACGACCGCGGCCTCGGCCCCGTTCCCTCCAAATGGAAGGGCAAGTGCGTCGCCGGAGAACATTTTCCGGCGAGTTCGTGCAACCGGAAACTCATCGGCGCGAGGTGGTTCTCAGGCGGATACGAGGCCACCCACGGGAAGATGAACGAGACCACTGAGTTCCGCTCGCCAAGAGACTCCGACGGCCACGGCACGCACACTGCGTCGATCGCCGCCGGGAGGTACGTCTCTCAGGCGTCCACGTTGGGGTACGCGAAGGGCGTCGCCGCCGGCATGGCGCCGAAGGCGCGGCTCGCGGTGTATAAAGTCTGCTGGAGCGACGGCTGCTACGACTCCGACATCCTCGCTGCCTTCGACGCCGCCGTGTCCGACGGCGTCGACGTGGCGTCGCTCAGCGTCGGAGGTGTTGTGGTGCCTTACCACCTCGATGTCATTGCTATTGGTGCCTTCGGCGCCGCCTCCGCCGGCGTTTTTGTCTCTGCCTCCGCTGGCAACGGCGGTCCCGGCGGACTCACGGTGACCAATGTGGCGCCGTGGGTGACCACCGTCGGTGCCGGAACGTTAGACCGAGATTTTCCGGCCAATGTGAAGCTTGGAAATGGAAAAATAGTACCTGGAATTAGTATTTATGGTGGACCGGGTCTAACTCCGGGTCGAATGTACCCGATTGTGTATGCAGGTGTTGGACAATTTGGCGGCGGCGGTGGAAGTGGTGGTGTTGATGGTTATTCATCGTCACTTTGTTTAGAAGGTTCCTTAGATCCTAAGTTGGTAAAAGGAAAAATTGTTGTGTGTGATAGAGGCATTAATTCAAGAGCTGCTAAAGGTGAGGAAGTTAAGAAAAATGGAGGGGTTGGCATGATTTTGGCAAATGGTGTATTTGATGGTGAAGGATTAGTAGCTGATTGCCATGTATTACCTGCCACGGCAGTTGGCGCCACCGGCGGCGATGAGATACGGAGTTACATTGGGAATTCGCGGACTCCGGCCACCGCGACAATCGTGTTCAAGGGGACAAGGCTAGGGGTTAGGCCAGCACCTGTGGTGGCATCGTTTTCAGCAAGAGGGCCAAACCCTGAGTCCCCAGAGATTTTGAAGCCTGATGTTATAGCTCCAGGATTGAACATTCTTGCAGCTTGGCCTGATCATGTTGGACCCTCTGGGGTACCCTCTGATGGGCGTAGGACTGAGTTTAACATCCTCTCTGGGACTTCAATGGCTTGTCCTCATGTTTCTGGTTTGGCTGCTTTGTTGAAAGCAGCACATCCTGATTGGAGTCCTGCTGCCATTAGGTCTGCTTTGATGACCACTGCTTACACTGTGGACAACAAGGGTGATCCCATGTTGGATGAGTCCACTGGGAATGTTTCATCAGTGTTTGATTATGGTGCTGGCCATGTTCATCCAGTGAAGGCCATGAACCCTGGATTGGTTTATGATATCTCCACTTCTGATTATGTGAATTTCTTGTGCAATTCAAATTACACCACCAACACTATCCATGTCATTACTAGGAGGAATGCTGATTGCAGTGGGGCTAAAAGAGCAGGACATTCTGGGAACCTGAATTACCCTTCATTGTCTGCAGTGTTTCAGCTATATGGAAAGAAGAGAATGGCTACACATTTTATTAGGACTGTGACCAATGTTGGGGACCCTAATTCAGTGTACAAGGTCACCATTAAGCCGCCGCGTGGAACGGTGGTCACAGTGAAGCCAGACACCTTGAATTTCAGGAGGGTGGGACAGAAGTTGAACTTTCTTGTTAGGGTTCAGATTAGGGCTGTTAAGCTTTCTCCTGGAGGTTCTAGTGTGAAGAGTGGCTCCATAGTTTGGTCTGATGGGAAGCATACTGTCACAAGTCCCTTGGTTGTGACAATGCAGCAGCCTCTGGATTAG	2415	0.5251	MQCDVFPLNLGNSIAKQYLSLRMAPPYPSLLILLFLLTSQVTCYSSEKEKSKTFIIQVQHEAKPSIFPTHKHWYDSSLSSISTTASVIHTYHTVFHGFSAKLSPSEAQKLQSLAHVITLIPEQLRSPHTTRSPEFLGLTTADRTGLLHETDFGSDLVIGVIDTGIWPERQSFNDRGLGPVPSKWKGKCVAGEHFPASSCNRKLIGARWFSGGYEATHGKMNETTEFRSPRDSDGHGTHTASIAAGRYVSQASTLGYAKGVAAGMAPKARLAVYKVCWSDGCYDSDILAAFDAAVSDGVDVASLSVGGVVVPYHLDVIAIGAFGAASAGVFVSASAGNGGPGGLTVTNVAPWVTTVGAGTLDRDFPANVKLGNGKIVPGISIYGGPGLTPGRMYPIVYAGVGQFGGGGGSGGVDGYSSSLCLEGSLDPKLVKGKIVVCDRGINSRAAKGEEVKKNGGVGMILANGVFDGEGLVADCHVLPATAVGATGGDEIRSYIGNSRTPATATIVFKGTRLGVRPAPVVASFSARGPNPESPEILKPDVIAPGLNILAAWPDHVGPSGVPSDGRRTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVDNKGDPMLDESTGNVSSVFDYGAGHVHPVKAMNPGLVYDISTSDYVNFLCNSNYTTNTIHVITRRNADCSGAKRAGHSGNLNYPSLSAVFQLYGKKRMATHFIRTVTNVGDPNSVYKVTIKPPRGTVVTVKPDTLNFRRVGQKLNFLVRVQIRAVKLSPGGSSVKSGSIVWSDGKHTVTSPLVVTMQQPLD*	805

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso7g0392	804	PRINTS	Subtilisin serine protease family (S8) signature	153	172	IPR015500	-
	Gso7g0392	804	PRINTS	Subtilisin serine protease family (S8) signature	231	244	IPR015500	-
	Gso7g0392	804	PRINTS	Subtilisin serine protease family (S8) signature	574	590	IPR015500	-
	Gso7g0392	804	ProSiteProfiles	Serine proteases, subtilase domain profile.	133	645	-	-
	Gso7g0392	804	CDD	PA_subtilisin_like	367	506	-	-
	Gso7g0392	804	Pfam	Peptidase inhibitor I9	53	125	IPR010259	-
	Gso7g0392	804	ProSitePatterns	Serine proteases, subtilase family, serine active site.	575	585	IPR023828	-
	Gso7g0392	804	PANTHER	SUBTILISIN-LIKE PROTEASE SBT1.5	31	803	-	-
	Gso7g0392	804	Gene3D	-	361	514	-	-
	Gso7g0392	804	CDD	Peptidases_S8_3	127	611	IPR034197	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso7g0392	Gso-Chr7	3712490	3715273	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso7g0392	53	803	Subtilisin-like Serine Gene Family	AT3G14240	77.147	0.0	1197

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso7g0392	-		-	gsj:114418214	1548.49

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso7g0392	7	3712490	3715273	Gso7g0392	7	3712490	3715273	ECH
	Gso7g0392	7	3712490	3715273	Gso16g0103	16	1117443	1120244	GST

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