Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso7g0387 | ATGGCCACTGCTACGAATGCCGCCGCCGCCCCACCACGCCAGCTCTCCCAGAAGGAAGCCGACATCCAGATGATGTTGGCCGCCGACGTCCACCTCGGCACCAAGAACTGCGACTTCCAAATGGAACGTTACATCTTCAAGCGCCGCAACGACGGGATTTACATTATTAACCTTGGGAAGACGTGGGAGAAGCTTCAGCTAGCAGCTAGGGTTATAGTTGCAATTGAGAACCCCCAGGATATCATTGTTCAATCTGCAAGGCCTTATGGGCAAAGAGCGGTTCTGAAGTTTGCTCAGTACACTGGTGCTCATGCTATTGCTGGAAGGCACACTCCTGGTACCTTCACCAATCAGCTTCAAACTTCCTTCAGCGAGCCTCGTCTCCTTATTCTTACCGATCCAAGAACAGATCACCAGCCTATTAAGGAAGCTGCTCTTGGGAATATTCCCACCATTGCTTTCTGTGACACCGATTCACCTATGAGGTACGTGGACATTGGAATTCCTGCCAACAACAAGGGCAAACACAGCATTGGTTGTCTCTTCTGGCTCCTTGCAAGGATGGTGTTGCAGATGAGGGGTACCATTCGCCCTGGCCTCAAATGGGATGTCATGGTTGATCTGTTCTTCTATAGAGAACCAGAGGAGGCTAAACAACAAGAGGAGGAGGAAGCTCCGGCGGTTGATTATGCCATCACGGATTTCAATGCAGGTGCTATTGCTGCTGATGGCCAGTGGCCTGGTACAATTGATCAATCATGGAGTGATGCAGTTCCTCAACCTATTCCAGCAGTACCTGGTGTCAACTGGGGGGCACCTGCAGAAGCACCTGCTGCTGCAGGAGGAGATTGGGGGGAAGCTGTTCCACCACCACAACAAATCCCTGTACCTCCCTCTGGAATTGATACTGTCCAACCATCTGGCTGGGATTAA | 933 | 0.5134 | MATATNAAAAPPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEEEAPAVDYAITDFNAGAIAADGQWPGTIDQSWSDAVPQPIPAVPGVNWGAPAEAPAAAGGDWGEAVPPPQQIPVPPSGIDTVQPSGWD* | 311 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso7g0387 | 310 | PRINTS | Ribosomal protein S2 signature | 22 | 40 | IPR001865 | GO:0003735|GO:0005840|GO:0006412 | |
Gso7g0387 | 310 | PRINTS | Ribosomal protein S2 signature | 52 | 61 | IPR001865 | GO:0003735|GO:0005840|GO:0006412 | |
Gso7g0387 | 310 | PRINTS | Ribosomal protein S2 signature | 101 | 118 | IPR001865 | GO:0003735|GO:0005840|GO:0006412 | |
Gso7g0387 | 310 | PRINTS | Ribosomal protein S2 signature | 126 | 143 | IPR001865 | GO:0003735|GO:0005840|GO:0006412 | |
Gso7g0387 | 310 | PRINTS | Ribosomal protein S2 signature | 143 | 154 | IPR001865 | GO:0003735|GO:0005840|GO:0006412 | |
Gso7g0387 | 310 | PRINTS | Ribosomal protein S2 signature | 164 | 178 | IPR001865 | GO:0003735|GO:0005840|GO:0006412 | |
Gso7g0387 | 310 | PANTHER | 40S RIBOSOMAL PROTEIN SA | 13 | 295 | - | - | |
Gso7g0387 | 310 | MobiDBLite | consensus disorder prediction | 264 | 310 | - | - | |
Gso7g0387 | 310 | PANTHER | 40S RIBOSOMAL PROTEIN SA | 13 | 295 | IPR005707 | GO:0003735|GO:0006412|GO:0015935 | |
Gso7g0387 | 310 | Gene3D | - | 21 | 227 | - | - | |
Gso7g0387 | 310 | CDD | RPS2 | 25 | 191 | IPR001865 | GO:0003735|GO:0005840|GO:0006412 | |
Gso7g0387 | 310 | SUPERFAMILY | Ribosomal protein S2 | 17 | 207 | IPR023591 | - | |
Gso7g0387 | 310 | TIGRFAM | uS2_euk_arch: ribosomal protein uS2 | 17 | 213 | IPR005707 | GO:0003735|GO:0006412|GO:0015935 | |
Gso7g0387 | 310 | Pfam | Ribosomal protein S2 | 124 | 189 | IPR001865 | GO:0003735|GO:0005840|GO:0006412 | |
Gso7g0387 | 310 | Pfam | Ribosomal protein S2 | 25 | 119 | IPR001865 | GO:0003735|GO:0005840|GO:0006412 | |
Gso7g0387 | 310 | ProSitePatterns | Ribosomal protein S2 signature 2. | 126 | 150 | IPR018130 | GO:0003735|GO:0005840|GO:0006412 | |
Gso7g0387 | 310 | Hamap | 40S ribosomal protein SA [rps-0]. | 9 | 257 | IPR027498 | GO:0003735|GO:0006412|GO:0015935 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso7g0387 | Gso-Chr7 | 3627497 | 3629717 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso7g0387 | 4 | 284 | Cytoplasmic Ribosomal Protein Gene Family | AT3G04770 | 74.825 | 2.73e-152 | 426 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso7g0387 | K02998 | - | gmx:548014 | 607.831 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso7g0387 | 7 | 3627497 | 3629717 | Gso7g0387 | 7 | 3627497 | 3629717 | ECH | |
Gso7g0387 | 7 | 3627497 | 3629717 | Gso16g0098 | 16 | 1047681 | 1049777 | GST |