Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0377 ATGGACGACGACGACGAGATCCAGTCGCATCCTTCGCCGGCGAGCGGATCCCCTCCGTCGTCGCCGAGGGCGAACGGTCGGATAACGGTGACGGTCGCGGCTCCGGCGCCTCAGGCGCCGCCACCACCGCCGAACAGTCTGGCATTAGCGCTTCCGATTCAGCAGCCGGCGAAGGGAAACGGCGGAGGAGGAGGCGGCGGCGGCGGAAGGGAGGATTGCTGGAGCGAAGGTGCGACGGCGGTGCTGATCGACGCGTGGGGAGAGAGGTATCTGGAACTGAGCAGAGGAAATCTGAAGCAGAAGCACTGGAAGGAGGTGGCGGATATCGTGAGCGTCAGAGAGGATTACACGAAGGCGCCGAAGACCGATATCCAGTGCAAAAACCGGATCGACACCGTTAAGAAGAAGTACAAATCGGAGAAGGCGAAGATCGCCGCCGGCGCCACCAGCAAGTGGCCGTTCTACGACCGACTGGAACAATTAATCGGTCCAAGCGCCAAGATCCCCGGCGTCGGCGGTGCCTCCGGCACCAGCGCTGCCGGAAACAGTAATTTACAACCGCAGAAAGTTCCGTTAGGAATTCCGGTCGGCGTTCGCGGCGGCGCGAATCAGTTTAACCATCCTCATAAACAGCCACAACCGGTTCCGTTGAAGAACCAGAAGATTCAGTTCCGGCGCCGCGGTCCTCCGGTGGAGTCCGATTCGGAGGAGCGAGACGCGTCGTCGCCGGCGTCGAGCGACAGTTTTCCGCCGGAGAGTTTCGAGAGGAAGAGGCCGCGGTTGATGAGTTCAAACACCACGAAAGGAAGCGGAGAAAGACGGAAGGCGAAGGGTTGGGGAAGCGCGGTGAGGGAACTGACGCAGGCGATTCTGAAATTCGGCGAGGCGTATGAACAAGCGGAGAGTTCGAAGCTGCAGCAGGTGGTGGAGATGGAGAAGCAGAGGATGAAATTCGCAAAGGATTTGGAGTTGCAGAGAATGCAGTTTTTCATGAAGACCCAGGTAGAGATTTCGCAGCTCAAACTTGGAAGAAAAGGTGGTAACCCTAGCAACAACCACCATGGCACCACCAACAATAACAACAGCAATCATAACAATAATAGTGGCAGTGAATGA 1116 0.5789 MDDDDEIQSHPSPASGSPPSSPRANGRITVTVAAPAPQAPPPPPNSLALALPIQQPAKGNGGGGGGGGGREDCWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVADIVSVREDYTKAPKTDIQCKNRIDTVKKKYKSEKAKIAAGATSKWPFYDRLEQLIGPSAKIPGVGGASGTSAAGNSNLQPQKVPLGIPVGVRGGANQFNHPHKQPQPVPLKNQKIQFRRRGPPVESDSEERDASSPASSDSFPPESFERKRPRLMSSNTTKGSGERRKAKGWGSAVRELTQAILKFGEAYEQAESSKLQQVVEMEKQRMKFAKDLELQRMQFFMKTQVEISQLKLGRKGGNPSNNHHGTTNNNNSNHNNNSGSE* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0377 371 MobiDBLite consensus disorder prediction 165 281 - -
Gso7g0377 371 MobiDBLite consensus disorder prediction 1 72 - -
Gso7g0377 371 Pfam Myb/SANT-like DNA-binding domain 71 161 IPR044822 -
Gso7g0377 371 Gene3D - 74 139 - -
Gso7g0377 371 MobiDBLite consensus disorder prediction 225 241 - -
Gso7g0377 371 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 1 341 IPR044823 -
Gso7g0377 371 MobiDBLite consensus disorder prediction 35 49 - -
Gso7g0377 371 MobiDBLite consensus disorder prediction 342 371 - -
Gso7g0377 371 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 1 341 - -
Gso7g0377 371 MobiDBLite consensus disorder prediction 10 27 - -
Gso7g0377 371 MobiDBLite consensus disorder prediction 344 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0377 Gso-Chr7 3566772 3568653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0377 1 354 Trihelix Transcription Factor Family AT3G14180 47.926 1.00e-106 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso7g0377 Myb_DNA-bind_4 2.9e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0377 - - gmx:100812599 587.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0377 7 3566772 3568653 Gso7g0377 7 3566772 3568653 ECH