Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0364 ATGGCCATAGCTCGGGCAATAATCCTCCAGCCAACTCTCATCATCATCGTGACTTTGCCTGTGATATATTCCATGACAGAAGCTGAAGCTTTGGTGAGTTTCAAAAGCTCCTTCTCCAACGCTGAACTTTTGGATAGTTGGGTCCCCGGTTCTGCACCCTGCAGTGAAGAAGATCAATGGGAAGGTGTAACTTGCAACAACGGCGTCGTCACGGGGCTTCGCCTTGGAGGAATGGGGTTAGTAGGGGAAATACACGTTGATCCATTGCTTGAACTCAAGGGTCTTCGACAAATAAGCCTCAACGACAATTCTTTCTCAGGTCCCATGCCTGAGTTCAACAGAATTGGGTTCCTGAAGGCCCTGTATTTGCAAGGAAACAAGTTTTCTGGGGATATTCCCACGGAATACTTCCAGAAAATGAGGTCTTTGAAGAAAGTGTGGCTATCTGATAACCTATTCACGGGGAAGATTCCATCGTCGTTGGCCGATATTCCTCAGCTTATGGAGTTGCACCTTGAGAACAACCAGTTTAGTGGAAACATTCCCGATCTGAGTAACCCGTCGTTGGCGATATTCGATGTCTCGAACAACAAATTGGAAGGTGGAATCCCTGCTGGTTTGTTGAGATTCAACGATAGTTCTTTTTCAGGGAATTCTGGTCTTTGTGATGAGAAGTTAAGGAAATCATGTGAAAAGACAATGGAGACCCCAAGTCCTGGTCCCATTGATGACGCACAAGACAAGGTTGTTGGTGACCATGTGCCTTCTGTGCCACATAGTAGTAGCTCATTCGAGGTTGCTGGCATTATAGTAGCGAGTGTGTTTCTTGTCTCACTAGTTGTGCTTTTAATTGTGAGATCAAGGAGAAAGAAGGAGGAGGAGAATTTTGATCATATAGTTGGACAACAAGTTAATGAAGGTGGTGCAGTGGAAGTTCAAGTGACTGCACCAGTGAAAAGGGTTTTGGATGCAGCTTCAACTTCAAGTACACCAATGAAAAAAACATCGTCCAGAAGGGGATCTATATCTTCTCAGAGCAAAAACGTTGGAGAGCTTGTGACGGTGAATGATGAGAAGGGCGTGTTTGGGATGTCTGATTTGATGAGAGCAGCCGCAGAAGTGCTTGGAAATGGAAGCTTTGGATCTTCTTACAAGGCCGTGATGGCTAATGGAGTGGCAGTGGTGGTGAAGAGGACTAGAGAAATGAATGTTCTGGAGAAAGATGATTTTGATGCAGAGATGAGGAAGCTTACAAAGCTTAAACACTGGAATATATTGACCCCTTTAGCTTATCATTTCAGAAAGGATGAGAAACTAGTGATCTCTGAGTATGTTCCAAGAGGCAGTCTATTGTTTTCCCTGCATGGTGATAGGAGACCATCACATGCTGAGCTAGATTGGCCAGCACGTATGAAGATTGTACGAGGAATTGCCGAAGGAATGCATTATCTTTACACAGAACTTAGTTCCTTGGATCTCCCACATGGCAATCTCAAGTCCAGCAATGTTCTCCTTGGACCAGACAATGAACCAATGCTTGTAGATTACGGGTTCAGCCACATGGTTAACCCTTCAAGCGCTGCAAACACACTATTCGCTTACAAGGCACCAGAGGCAGCACAACATGGCCAAGTTTCGCGTAGTTGTGATGTTTACTGTCTCGGGGTTGTGATAATTGAGATACTAACAGGAAAGTACCCTTCTCAATATCTCAGCAATGGAAAGGGTGGAGCCGATGTGGTGCAATGGGTTGAAACTGCAATCTCTGAGGGAAGGGAAACAGAAGTGCTTGATCCTGAGATTGCAAGCTCTAGGAATTGGCTTGGTGAGATGGAGCAACTCCTCCACATTGGTGCTGCTTGCACTCAAAGCAACCCTCAGCGGCGGTTAGACATGGGAGAAGCCGTTAGAAGGATAAAGGAGATTAACACTGAGGGTGGACAAGAATCAAGAACAATAGAGGAGACATGGAACCAAGGGTATCATGATCAACAATCACAGAGGAGACATGGAACAAACAGCTTCGATAATATTCAGTTAATGTAA 2046 0.4511 MAIARAIILQPTLIIIVTLPVIYSMTEAEALVSFKSSFSNAELLDSWVPGSAPCSEEDQWEGVTCNNGVVTGLRLGGMGLVGEIHVDPLLELKGLRQISLNDNSFSGPMPEFNRIGFLKALYLQGNKFSGDIPTEYFQKMRSLKKVWLSDNLFTGKIPSSLADIPQLMELHLENNQFSGNIPDLSNPSLAIFDVSNNKLEGGIPAGLLRFNDSSFSGNSGLCDEKLRKSCEKTMETPSPGPIDDAQDKVVGDHVPSVPHSSSSFEVAGIIVASVFLVSLVVLLIVRSRRKKEEENFDHIVGQQVNEGGAVEVQVTAPVKRVLDAASTSSTPMKKTSSRRGSISSQSKNVGELVTVNDEKGVFGMSDLMRAAAEVLGNGSFGSSYKAVMANGVAVVVKRTREMNVLEKDDFDAEMRKLTKLKHWNILTPLAYHFRKDEKLVISEYVPRGSLLFSLHGDRRPSHAELDWPARMKIVRGIAEGMHYLYTELSSLDLPHGNLKSSNVLLGPDNEPMLVDYGFSHMVNPSSAANTLFAYKAPEAAQHGQVSRSCDVYCLGVVIIEILTGKYPSQYLSNGKGGADVVQWVETAISEGRETEVLDPEIASSRNWLGEMEQLLHIGAACTQSNPQRRLDMGEAVRRIKEINTEGGQESRTIEETWNQGYHDQQSQRRHGTNSFDNIQLM* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0364 681 Gene3D Ribonuclease Inhibitor 21 114 IPR032675 -
Gso7g0364 681 SUPERFAMILY L domain-like 25 210 - -
Gso7g0364 681 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 648 - -
Gso7g0364 681 Gene3D Ribonuclease Inhibitor 117 232 IPR032675 -
Gso7g0364 681 SUPERFAMILY Protein kinase-like (PK-like) 373 638 IPR011009 -
Gso7g0364 681 ProSiteProfiles Protein kinase domain profile. 369 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0364 681 Pfam Protein kinase domain 373 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0364 681 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515
Gso7g0364 681 Gene3D Transferase(Phosphotransferase) domain 1 445 667 - -
Gso7g0364 681 MobiDBLite consensus disorder prediction 325 345 - -
Gso7g0364 681 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 6 648 - -
Gso7g0364 681 MobiDBLite consensus disorder prediction 659 681 - -
Gso7g0364 681 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Gso7g0364 681 Gene3D Phosphorylase Kinase; domain 1 337 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0364 Gso-Chr7 3437391 3439937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0364 13 642 Receptor kinase-like Gene Family AT3G42880 43.235 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso7g0364 Pkinase 3.8e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0364 - - gmx:100809208 1293.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0364 7 3437391 3439937 Gso7g0364 7 3437391 3439937 ECH
Gso7g0364 7 3437391 3439937 Gso16g0078 16 889772 892524 GST