Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0337 ATGATGAGTGCAAGTGCAAGAAATAGGTCTCCTTTCACGCAAACTCAGTGGCAAGAGCTTGAGCATCAAGCTCTTGTTTTTAAGTACATGGTTACAGGAACACCCATCCCACCAGATCTCATCTACTCTATTAAAAGAAGTCTAGACACTTCAATTTCTTCAAGGCTCTTCCCACATCATCCAATTGGGTGGGGATGTTTTGAAATGGGATTTGGCAGAAAAGTAGACCCAGAGCCAGGGAGGTGCAGAAGAACAGATGGCAAGAAATGGAGATGCTCAAAGGAGGCATATCCAGACTCCAAGTACTGTGAAAGACACATGCACAGAGGCAGAAACCGTTCAAGAAAGCCTGTGGAAGTTTCTTCAGCAATAAGCACCGCCACAAACACCTCCCAAACAATCCCATCTTCTTATACCCGAAACCTTTCCTTGACCAACCCCAACATGACACCACCCTCTTCCTTCCCTTTCTCTCCTTTGCCCTCTTCTATGCCTATTGAGTCCCAACCCTTTTCCCAATCCTACCAAAACTCTTCTCTCAATCCCTTCTTCTACTCCCAATCAACCTCCTCTAGACCCCCAGATGCTGATTTTCCACCCCAAGATGCCACCACCCACCAGCTATTCATGGACTCTGGGTCTTATTCGCATGATGAAAAGAATTATAGGCATGTTCATGGAATAAGAGAAGATGTGGATGAGAGAGCTTTCTTCCCAGAAGCATCAGGATCAGCTAGGAGCTACACTGAATCATACCAGCAACTATCAATGAGCTCCTACAAGTCCTATTCAAACTCCAACTTTCAGAACATCAATGATGCCACCACCAACCCAAGACAGCAAGAGCAGCAACAACAACAACACTGCTTTGTTTTGGGGACAGACTTCAAATCAACAAGACCAACTAAAGAGAAAGAAGCTGAGACAGCTACGGGTCAGAGACCCCTTCACCGTTTCTTTGGGGAGTGGCCACCAAAGAACACAACAGATTCATGGCTAGATCTTGCTTCCAACTCCAGAATCCAAACCGATGAATGA 1038 0.4566 MMSASARNRSPFTQTQWQELEHQALVFKYMVTGTPIPPDLIYSIKRSLDTSISSRLFPHHPIGWGCFEMGFGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEVSSAISTATNTSQTIPSSYTRNLSLTNPNMTPPSSFPFSPLPSSMPIESQPFSQSYQNSSLNPFFYSQSTSSRPPDADFPPQDATTHQLFMDSGSYSHDEKNYRHVHGIREDVDERAFFPEASGSARSYTESYQQLSMSSYKSYSNSNFQNINDATTNPRQQEQQQQQHCFVLGTDFKSTRPTKEKEAETATGQRPLHRFFGEWPPKNTTDSWLDLASNSRIQTDE* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0337 345 MobiDBLite consensus disorder prediction 298 312 - -
Gso7g0337 345 ProSiteProfiles QLQ domain profile. 11 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gso7g0337 345 MobiDBLite consensus disorder prediction 109 202 - -
Gso7g0337 345 ProSiteProfiles WRC domain profile. 76 120 IPR014977 -
Gso7g0337 345 Pfam QLQ 11 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gso7g0337 345 PANTHER - 1 344 IPR031137 GO:0005634|GO:0006351|GO:0032502
Gso7g0337 345 MobiDBLite consensus disorder prediction 118 151 - -
Gso7g0337 345 Pfam WRC 77 119 IPR014977 -
Gso7g0337 345 PANTHER GROWTH-REGULATING FACTOR-LIKE PROTEIN 1 344 - -
Gso7g0337 345 SMART QLQ_2 10 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gso7g0337 345 MobiDBLite consensus disorder prediction 160 195 - -
Gso7g0337 345 MobiDBLite consensus disorder prediction 295 345 - -
Gso7g0337 345 MobiDBLite consensus disorder prediction 330 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0337 Gso-Chr7 3185301 3187709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0337 1 119 GRF Transcription Factor Family AT3G13960 71.774 8.42e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Gso7g0337 WRC 1.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0337 - - gmx:100806024 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0337 7 3185301 3187709 Gso7g0337 7 3185301 3187709 ECH
Gso7g0337 7 3185301 3187709 Gso16g0056 16 649180 651558 GST