Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0333 ATGAGAAGAAGTCCTTGTTGTTCTAAGGAAGGGTTGAACAAAGGAGCATGGACAGCTCTGGAGGATAAAATTTTGACAGAATACATTAACATTCATGGCGAAGGAAAATGGAGACACTTGCCCAAAAGAGCAGGTCTTAAGAGATGTGGAAAAAGTTGCAGGCTAAGATGGTTGAATTATCTAAGACCTGACATTAAAAGAGGCAACATAACTAATGATGAAGAGGCGCTTATAATCAGGCTTCACAGTCTTCTCGGAAACAGGTGGTCCTTGATTGCTGGACGGCTTCCAGGACGAACAGACAATGAAATCAAGAATTATTGGAACACCAACATTGGAAGGAAACTTCAAAATTGTTTACTTTCAGAAATTCGGGACTTGCATATAATCACAGTACCCGATTTCTTTTGA 411 0.399 MRRSPCCSKEGLNKGAWTALEDKILTEYINIHGEGKWRHLPKRAGLKRCGKSCRLRWLNYLRPDIKRGNITNDEEALIIRLHSLLGNRWSLIAGRLPGRTDNEIKNYWNTNIGRKLQNCLLSEIRDLHIITVPDFF* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0333 136 Gene3D - 14 66 - -
Gso7g0333 136 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 118 - -
Gso7g0333 136 SMART sant 13 63 IPR001005 -
Gso7g0333 136 SMART sant 66 114 IPR001005 -
Gso7g0333 136 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Gso7g0333 136 CDD SANT 16 61 IPR001005 -
Gso7g0333 136 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Gso7g0333 136 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Gso7g0333 136 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Gso7g0333 136 CDD SANT 71 112 IPR001005 -
Gso7g0333 136 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Gso7g0333 136 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Gso7g0333 136 Gene3D - 70 125 - -
Gso7g0333 136 PANTHER TRANSCRIPTION FACTOR TT2 1 118 - -
Gso7g0333 136 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0333 Gso-Chr7 3146102 3153978 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0333 1 116 MYB Transcription Factor Family AT2G16720 75.862 3.43e-61 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gso7g0333 Myb_DNA-binding 6.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0333 K09422 - gmx:100804950 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso17g0421 17 3835676 3837337 Gso7g0333 7 3146102 3153978 ECH
Gso7g0333 7 3146102 3153978 Gso7g0333 7 3146102 3153978 ECH
Gso7g0333 7 3146102 3153978 Gso16g0052 16 607995 609454 GST