Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0331 ATGGGTAGACGACCCTGCTGCCCCAAAGAGATCAACAAAGGTGCTTGGTCTCGAGAGGAAGATGAAACCCTCTCCAAATATGTTTCCATCCATGGAGAAGGAAAATGGCAGAAGGTTGCCCAAAATGCAGGTTTAAAGAGATGCGGAAAAAGTTGCAGACAAAGATGGTTGAATTATCTCAAGCCCGGCATAAAAAGAGGCCACATCTCTGTTGATGAAGAGGATATGATTATAAGACTTCATCGTCTTCTTGGTAACAGATGGGCATTGATTGCAAAGAGGCTACCTGGACGAACAGACAATGAAATCAAGAACTACTGGAACACTAATCTGTCAAGGAAGTTACAGAAACATCCTACATCATCAGTTTCTTCACTTCAACACAAACGTCATGAAAAGGAAAAGACCAAACAAATGCATGTAGCACCCGAAGCTCCACGGCGTAGGAGGGTTAATGCAGTTGAATACAGTAAAAATTTGGAGAATGGTGGGTGTGGAAATAGGCCTAGTACAACTCCCAGTCCCTCAAATATAGAAGAGGGTAGTAGTGAAGAAGCTTCTTTTAGTGATTTTCTCATGGATATTGATCAAATTGATGATTCAAACTCAAAGGTCCCACAAAAGGAAGAGGATCACCACCACAACAAGGTAGAGTTAATAACCAACAACAGTCCTAGCTCTTCATCACTTTCTGATCATTGTCACCATCTCTTGCCAGAGAAATTTGACCCTTTTGAGACCTTTCTGGATGTGGAGCTTCAGAGGATGGCTTCCTTTCTTGGAGTTGAAAATGATTGA 798 0.4198 MGRRPCCPKEINKGAWSREEDETLSKYVSIHGEGKWQKVAQNAGLKRCGKSCRQRWLNYLKPGIKRGHISVDEEDMIIRLHRLLGNRWALIAKRLPGRTDNEIKNYWNTNLSRKLQKHPTSSVSSLQHKRHEKEKTKQMHVAPEAPRRRRVNAVEYSKNLENGGCGNRPSTTPSPSNIEEGSSEEASFSDFLMDIDQIDDSNSKVPQKEEDHHHNKVELITNNSPSSSSLSDHCHHLLPEKFDPFETFLDVELQRMASFLGVEND* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0331 265 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Gso7g0331 265 MobiDBLite consensus disorder prediction 163 184 - -
Gso7g0331 265 MobiDBLite consensus disorder prediction 114 186 - -
Gso7g0331 265 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Gso7g0331 265 Pfam Myb-like DNA-binding domain 68 111 IPR001005 -
Gso7g0331 265 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 261 - -
Gso7g0331 265 CDD SANT 15 60 IPR001005 -
Gso7g0331 265 MobiDBLite consensus disorder prediction 125 155 - -
Gso7g0331 265 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Gso7g0331 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 115 IPR017930 -
Gso7g0331 265 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Gso7g0331 265 PANTHER MYB TRANSCRIPTION FACTOR 1 261 - -
Gso7g0331 265 CDD SANT 70 111 IPR001005 -
Gso7g0331 265 Gene3D - 13 65 - -
Gso7g0331 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 64 IPR017930 -
Gso7g0331 265 SMART sant 65 113 IPR001005 -
Gso7g0331 265 SMART sant 12 62 IPR001005 -
Gso7g0331 265 Gene3D - 70 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0331 Gso-Chr7 3126747 3128656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0331 1 157 MYB Transcription Factor Family AT4G09460 53.797 2.07e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gso7g0331 Myb_DNA-binding 1.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0331 K09422 - gmx:100101858 538.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0331 7 3126747 3128656 Gso7g0331 7 3126747 3128656 ECH
Gso7g0331 7 3126747 3128656 Gso16g0051 16 596982 598886 GST