Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0324 ATGCCATATTCTTATTCGTTCCGAGTAGTTTCTCATACAATTATCAAACATGTACTTGTTTGTCTCTTGCTGGCAATAGCAAAGATAGACAATAATAATTCTTCAAATCCAGTGACATGTTTTACTTGTCGTCCCAATGATACCCCTCAGATAAAGTACGATGTCTTTGTTAGCTTTAGCGGCGCTGACATACGACAAGATTTCCTTAGCCATTTGGTTGAGGGTTTTTATCGAAGGCAAATTCATGCGTTTGTAGATTACAAGATTCTCAAAGGGGATCAACTATCTGAAGCACTTCTTGATGCAATTGAAGGATCATTAATTTCATTGATTATATTTTCAGAAAACTATGCTTCTTCGCATTGGTGTTTGTTTGAACTTGTGAAAATTGTTGAGTGTAGAAAAAAAGATGGGCAGATTTTACTACCTATCTTCTACAAAGTGGATCCTTCAAATGTACGATATCAAAAGGGGACTTATGGAGATGCCTTCGCTAAACACGAAGTAAGACATAATTTGACCACTATGCAGACCTGGAGATCTGCTTTGAATGAATCTGCTAATCTATCAGGATTTCATTCATCAACTTTTCGGGATGAAGCTGAGCTTGTTAAAGAGATAGTTAAATGTGTGTCGTTGAGGTTGAATCATGTGCACCAAGTTAACTCCAAAGGGCTTGTTGGAGTTGGTAAACGAATTGCACATGTAGAATCATTGCTACAATTAGAAGCAACAGATGTTCGTGTTATTGGGATCTGGGGTATGGGAGGTATTGGTAAGACGACCATTGCCCAAGAAGTATATAATAAACTCTGTTTTGAATATGAAGGTTGTTGTTTTTTGGCTAACATAAGAGAAGAGTCGGGAAGACATGGAATTATCTCTTTAAAGAAAAAGCTTTTTTCAACATTATTAGGTGAAGAAGATTTGAAAATTGACACACCTAATGGATTGCCTCAATATGTTGAGAGAAGGCTTCGTCGTATAAAAGTTCTTATCATTCTTGATGATGTCAATGATTCTGAACAACTGGAAATTTTAGCTGGAACACGTGATTGGTTTGGATTAGGTAGCAGAATCATCATAACAACTAGAGATAAGCAGGTACTTGCTAAAGAGTCTGCTAATATATACGAGGTTGAGACATTAAACTTTGATGAATCCTTACGGCTTTTCAATTTGAATGCCTTTAAAGAAGTTCATCTTGAAAGAGAGTACCATGAGCTTTCAAAGAAAGTGGTGAATTATGCACAAGGCATTCCATTAGTTCTTAAAGTTTTGGGTCACCTTCTTCATGGAAAAGAGAAAGAAATTTGGGAAAGCCAACTTGAAAGGCTTAAGAAAGTGCAAAGCAAAAAGGTTCATGATATTATCAAATTGAGCTACAATGATCTTGATCAGGATGAAAAGAAGATATTTTTGGATATTGCATGTTTTTTCGATGGACTGAATCTGAAAGTAAACAAAATAAAAATTTTATTGAAAGATCATGATTATTCAGTGGCTGCGGGATTAGAAAGGTTGAAGGATAAAGCTCTTATTAGTGTTTCTCAAGAAAATATTGTAACCATGCACAACATCATACAAGAAACAGCTTGGCAGATTGCTCGCCAAGAATCCATTGAAGATCCTAGAAGCCAAAGTCGACTATTGGATCCTGATGACGTTTATCTAGTACTAAAATATAACAAGGGTAACGAGGCTATCAGAAGCATAGTCATCAACTTGTCGGGAATCAAGCAATTGCAATTAAACCCTCAAGTATTTGCTAAGATGAGCAAACTATATTTTCTAGATTTTTATAATAAAGGGTCCTGCAGTTGCCTCCGGGAACAAGGGGGCTTGTATCTTCCCCAAGGGCTTGAATCTTTGTCCAATGAATTGAGATATCTTCGTTGGACCCATTACCCTTTGGAATCTCTGCCTTCAAAGTTTTCAGCTGAAAATCTTGTTGAACTGAACTTGCCCTATAGCCGAGTGAAAAAACTTTGGCAAGCAGTGCCAGATCTTGTGAATATGAGGATCCTTATACTCCATTCATCCACACAACTAAAGGAGCTGCCTGACCTATCAAAGGCCACAAATCTTAAAGTAATGGATCTCCGATTTTGTGTAGGGTTAACTAGTGTACATCCATCAGTTTTCTCTCTCAAAAAGCTTGAGAAATTGTATCTAGGTGGTTGCTTTTCCCTTAGAAGCCTCCGAAGCAATATCCATTTGGACTCTCTTCGTTATCTCTCCCTCTATGGCTGCATGTCACTGAAGTATTTCTCAGTGACCTCAAAGAATATGGTAAGGTTGAATTTAGAACTCACTAGTATCAAACAATTGCCTTCATCTATTGGACTTCAAAGCAAGCTTGAAAAGCTACGTCTAGCATACACTTACATTGAGAACTTACCAACAAGTATCAAGCATCTTACAAAGCTGCGACATCTAGATGTAAGACATTGCAGGGAGCTTCGAACTCTACCGGAGCTTCCCCCGTCACTTGAAACACTAGATGCTCGTGGATGTGTATCATTGGAGACTGTAATGTTCCCTTCTACTGCTGGAGAACAACTGAAGGAAAATAAGAAAAGGGTTGCTTTCTGGAACTGCTTGAAATTGGATGAACATTCTCTCAAGGCTATTGAGCTGAATGCACAAATTAACATGATGAAATTTGCACACCAACATTTGTCCACATTTGGTGATGCCCATCAAGGTACCTATGTGTACCCGGGAAGCAAAGTTCCAGAATGGTTGGTGCATAAGACAATACAGCGTGATTACGTGACTATTGATCTCTCTTTTGTTCTTGCTCCACACTCCTCTGATCACTTGGGCTTCATTTTTGGCTTCGTTGTTCCGGAAGTCCCTAATGAGGGTTTGGTTTTGGAATTTAAGATAAGCACTGGAGGAGAAGGTGAAGGTAGCAATATCAATGTGTACTTAGACAGACCACGTCATGGTATTAAATCGGATCATGTGTATCTAATGTATGACCAAGCATGTTCTCGCTACCTAAATAGTCGTGCCAAACATCATCCAAGGTTGAAGATTAAGGTTACAGTAGCATCGCGAACGCACACATCCAAGTATGTACCATTGCAGTTAAGAGGGTTTGGAGTCAGCACAATCAACACTACACAATACCTCAGTTTTGTTCGTAAAGTAGAATTGGGTGATGGTATTCCAAATGCCCCAAATTTGTTTAGATTTTTTTGGACTTTCTGCCTTGCTGTTTTTTTTGGGACTTCTAGGATTTATTTTAGAAGGTTAGTAGAATAA 3273 0.3822 MPYSYSFRVVSHTIIKHVLVCLLLAIAKIDNNNSSNPVTCFTCRPNDTPQIKYDVFVSFSGADIRQDFLSHLVEGFYRRQIHAFVDYKILKGDQLSEALLDAIEGSLISLIIFSENYASSHWCLFELVKIVECRKKDGQILLPIFYKVDPSNVRYQKGTYGDAFAKHEVRHNLTTMQTWRSALNESANLSGFHSSTFRDEAELVKEIVKCVSLRLNHVHQVNSKGLVGVGKRIAHVESLLQLEATDVRVIGIWGMGGIGKTTIAQEVYNKLCFEYEGCCFLANIREESGRHGIISLKKKLFSTLLGEEDLKIDTPNGLPQYVERRLRRIKVLIILDDVNDSEQLEILAGTRDWFGLGSRIIITTRDKQVLAKESANIYEVETLNFDESLRLFNLNAFKEVHLEREYHELSKKVVNYAQGIPLVLKVLGHLLHGKEKEIWESQLERLKKVQSKKVHDIIKLSYNDLDQDEKKIFLDIACFFDGLNLKVNKIKILLKDHDYSVAAGLERLKDKALISVSQENIVTMHNIIQETAWQIARQESIEDPRSQSRLLDPDDVYLVLKYNKGNEAIRSIVINLSGIKQLQLNPQVFAKMSKLYFLDFYNKGSCSCLREQGGLYLPQGLESLSNELRYLRWTHYPLESLPSKFSAENLVELNLPYSRVKKLWQAVPDLVNMRILILHSSTQLKELPDLSKATNLKVMDLRFCVGLTSVHPSVFSLKKLEKLYLGGCFSLRSLRSNIHLDSLRYLSLYGCMSLKYFSVTSKNMVRLNLELTSIKQLPSSIGLQSKLEKLRLAYTYIENLPTSIKHLTKLRHLDVRHCRELRTLPELPPSLETLDARGCVSLETVMFPSTAGEQLKENKKRVAFWNCLKLDEHSLKAIELNAQINMMKFAHQHLSTFGDAHQGTYVYPGSKVPEWLVHKTIQRDYVTIDLSFVLAPHSSDHLGFIFGFVVPEVPNEGLVLEFKISTGGEGEGSNINVYLDRPRHGIKSDHVYLMYDQACSRYLNSRAKHHPRLKIKVTVASRTHTSKYVPLQLRGFGVSTINTTQYLSFVRKVELGDGIPNAPNLFRFFWTFCLAVFFGTSRIYFRRLVE* 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0324 1090 ProSiteProfiles TIR domain profile. 51 215 IPR000157 GO:0007165
Gso7g0324 1090 Gene3D Ribonuclease Inhibitor 740 879 IPR032675 -
Gso7g0324 1090 SUPERFAMILY L domain-like 572 843 - -
Gso7g0324 1090 Pfam TIR domain 52 221 IPR000157 GO:0007165
Gso7g0324 1090 SUPERFAMILY Toll/Interleukin receptor TIR domain 45 192 IPR035897 -
Gso7g0324 1090 Pfam Leucine Rich Repeat 649 667 IPR011713 -
Gso7g0324 1090 Gene3D - 50 216 IPR035897 -
Gso7g0324 1090 Gene3D - 217 381 IPR027417 -
Gso7g0324 1090 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 212 476 IPR027417 -
Gso7g0324 1090 SMART till_3 52 189 IPR000157 GO:0007165
Gso7g0324 1090 Gene3D Ribonuclease Inhibitor 463 739 IPR032675 -
Gso7g0324 1090 PRINTS Disease resistance protein signature 249 264 - -
Gso7g0324 1090 PRINTS Disease resistance protein signature 325 339 - -
Gso7g0324 1090 PRINTS Disease resistance protein signature 417 431 - -
Gso7g0324 1090 PRINTS Disease resistance protein signature 805 821 - -
Gso7g0324 1090 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 39 1082 - -
Gso7g0324 1090 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 39 1082 IPR044974 GO:0006952
Gso7g0324 1090 SUPERFAMILY "Winged helix" DNA-binding domain 452 561 IPR036390 -
Gso7g0324 1090 Gene3D - 382 462 IPR042197 -
Gso7g0324 1090 Pfam NB-ARC domain 239 464 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0324 Gso-Chr7 3047772 3053348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0324 53 851 WRKY Transcription Factor Family AT4G12020 34.815 1.75e-118 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0324 - - gmx:100802823 2147.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0324 7 3047772 3053348 Gso16g0045 16 529056 533858 GST