Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0322 ATGGAACTCTATCCTTGGCTTCTCATAACTGGAACACTGGTAATTTCTTTCACATTTTTCACTCTCACCATGCTCGGATGGTGCATTAATACCAATCACACGCGATCCCTTCCTCCAGCAGGCTTATCTTTTGATGATAAGTTCTCTCCTTGCATGAGTTTAGAGTCTCATTCAATTACCTTCCATTACAAGGCTGCAGAAGGCACAAACCAGACTGAATGTGTTATCTGCTTGACAAGTTTTGAAGAAGAGGAAAGTGTAAGGAAGCTTCACACTTGCAGGCACATCTTCCACACCTCTTGCATTGATAAGTGGCTTGGCTCTCATTCTGGCTGTCCACTGTGCCGCACTCAGATTGACAAAGTGAATTCACCAAATAGCAGAGTGGCTTTGGAAGAAAATGATCGTATGATCATGGTCATTGTTAACTCCTGA 435 0.4299 MELYPWLLITGTLVISFTFFTLTMLGWCINTNHTRSLPPAGLSFDDKFSPCMSLESHSITFHYKAAEGTNQTECVICLTSFEEEESVRKLHTCRHIFHTSCIDKWLGSHSGCPLCRTQIDKVNSPNSRVALEENDRMIMVIVNS* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0322 144 SMART ring_2 74 115 IPR001841 -
Gso7g0322 144 Pfam Ring finger domain 73 116 IPR001841 -
Gso7g0322 144 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 52 125 IPR013083 -
Gso7g0322 144 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 46 136 - -
Gso7g0322 144 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 46 136 IPR044675 -
Gso7g0322 144 ProSiteProfiles Zinc finger RING-type profile. 74 116 IPR001841 -
Gso7g0322 144 SUPERFAMILY RING/U-box 63 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0322 Gso-Chr7 3040837 3041271 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0322 58 130 C3H Transcription Factor Family AT5G17600 49.333 1.14e-18 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0322 - - gmx:102661636 306.219