Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0319 ATGTTGACTTGCATAGCGTGTACCAAGCAACTCAACAATGGATCTCTTCGCCAAGAAGAGGGGGAAGAAGCTGTTCACACTCCCAGCACCAAGCAAGCCATCAAGGCTCTCACTTCTCAGATCAAGGACATGGCAGTGAAGGCTTCTGGGGCATATAAGAGCTGCAGGCCATGTTCAGGATCTTCAAATGGTAACAGGAATAGGAAGTATGCAGACTCAGATATGGGGTCAGATTCAGCAAGGTTCAACTGGGCCTACCGAAGAACCGGGAGCTCCAATTCAACCCCAAGGATGTGGGGGAAGGAAGTGGAAAATGGTAGGGTGAAAGGGCTTTCAAGTGGAGAAGGAACACCAGCATCAGTGAGTGGACGAACTGAGTCAGTGGTGTTCATGGAGGAGGATGAGCCTAAGGAGTGGATTGCACAAGTTGAGCCTGGTGTGCTTATTACTTTTGTTTCATTGCCTCAGGGAGGGAATGATCTCAAGAGGATACGGTTCAGTCGTGAAATGTTTAATAAATGGCAAGCTCAGAGGTGGTGGGCAGAGAATTATGACAAGGTCATGGAATTGTACAATGTTCAAAGGTTCAATCAGCAAGCAGTTCCTCTTCCAACCCCACCTAGATCTGAAGACGAGAGCTCAAAGATTGAATCTGCTAGGGACAGTCCTGCCACTCCTCCACTCAGCAAAGAACGTGCACCCCGGCATTTTCACCATCCAATGGGAATGGGCTACTCCTCATCAGATTCACTGGATCGCCACCAAATGCAACCCCACCCTTGCTATGAAACAAGCGGTCTGGCATCAACACCTAATCTTTCCAACATTAGTGCACCAAAGACCGAAAGATCATCCCTTGATGGTTCTGTAAGGACCAGTTCATCTGGAGAAGATCACTCGGGCGAGTTTTCAATCAGCAATGCCAGTGATATGGAAACTGAATGGGTTGAACAGGATGAACCAGGAGTATACATCACTATCAGAGCACTGCCAGGTGGAACCAGAGAACTCAGACGTGTCCGGTTCAGCCGAGAAAGGTTTGGAGAAATGCATGCGAGATTGTGGTGGGAAGAGAACCGTGCTAGGATACAAGAACAATACTTGTGA 1107 0.4824 MLTCIACTKQLNNGSLRQEEGEEAVHTPSTKQAIKALTSQIKDMAVKASGAYKSCRPCSGSSNGNRNRKYADSDMGSDSARFNWAYRRTGSSNSTPRMWGKEVENGRVKGLSSGEGTPASVSGRTESVVFMEEDEPKEWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNQQAVPLPTPPRSEDESSKIESARDSPATPPLSKERAPRHFHHPMGMGYSSSDSLDRHQMQPHPCYETSGLASTPNLSNISAPKTERSSLDGSVRTSSSGEDHSGEFSISNASDMETEWVEQDEPGVYITIRALPGGTRELRRVRFSRERFGEMHARLWWEENRARIQEQYL* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0319 368 ProSiteProfiles BRX domain profile. 137 192 IPR013591 -
Gso7g0319 368 MobiDBLite consensus disorder prediction 262 307 - -
Gso7g0319 368 Pfam Transcription factor BRX N-terminal domain 22 58 IPR027988 -
Gso7g0319 368 ProSiteProfiles BRX domain profile. 313 368 IPR013591 -
Gso7g0319 368 MobiDBLite consensus disorder prediction 200 307 - -
Gso7g0319 368 PANTHER PROTEIN BREVIS RADIX-LIKE 3 1 368 - -
Gso7g0319 368 Pfam Transcription factor regulating root and shoot growth via Pin3 312 367 IPR013591 -
Gso7g0319 368 Pfam Transcription factor regulating root and shoot growth via Pin3 137 191 IPR013591 -
Gso7g0319 368 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 368 IPR044532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0319 Gso-Chr7 2989155 2993775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0319 1 368 Major Intrinsic Protein MIP AT1G31880 49.479 5.13e-105 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0319 - - gmx:100805480 746.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0319 7 2989155 2993775 Gso7g0319 7 2989155 2993775 ECH
Gso7g0319 7 2989155 2993775 Gso16g0041 16 464143 468834 GST