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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Gso7g0315
ATGGACTCACGCACGTATAATCCTCGCACCGTCGAAGAGGTTTTTAGGGATTTCAAGGGCCGAAGAGCTGGTCTCATCAAAGCCCTAACCACTGATGTTGAAGATTTTTACAACCAATGTGATCCTGAGAAAGAGAATTTGTGCTTGTATGGCTTTCCCAGTGAGCAGTGGGAAGTAAATTTACCTGCTGAAGAAGTACCACCAGAGCTTCCTGAGCCCGTGCTGGGCATTAACTTTGCTAGGGATGGCATGCAAGAAAAAGACTGGCTATCTTTAGTTGCTGTTCATAGTGATGCATGGTTACTTGCTATTGCATTCTATTTTGGAGCCAGATTTGGGTTTGATAAAGCTGACAGGAAACGGCTTTTCAACATGATCAATGAACTGCCAACAATATTTGAAGTTGTTACTGGTGCAGCAAAGAAGCAAGTTAAGGAGAAGTCTTCAGTTTCAAACCACAGTGGCAGCAAGTCTAAGTCCAGCTCTAAGCGAGCTTCGGAATCTCAGGCTAGACAGCCAAAGCCATTGCAATCAAAAGAAGAGGATGAAGAACTGGACGATCAAGATGACGATGAACATGGAGAGACCTTGTGTGGGGCATGTGGTGAACATTATGGCACTGATGAATTCTGGATTTGTTGTGACATCTGTGAGAAGTGGTTCCATGGTAAATGCGTGAAGATCACCCCTGCTAGGGCAGAGCATATCAAGCAATACAAGTGCCCATCATGCAGTAACAAGAGAGCTCGCCCCTGA
756
0.4511
MDSRTYNPRTVEEVFRDFKGRRAGLIKALTTDVEDFYNQCDPEKENLCLYGFPSEQWEVNLPAEEVPPELPEPVLGINFARDGMQEKDWLSLVAVHSDAWLLAIAFYFGARFGFDKADRKRLFNMINELPTIFEVVTGAAKKQVKEKSSVSNHSGSKSKSSSKRASESQARQPKPLQSKEEDEELDDQDDDEHGETLCGACGEHYGTDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP*
252
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Gso7g0315
251
Pfam
PHD-finger
198
247
IPR019787
-
Gso7g0315
251
SUPERFAMILY
FYVE/PHD zinc finger
187
248
IPR011011
-
Gso7g0315
251
SMART
PHD_3
197
245
IPR001965
-
Gso7g0315
251
MobiDBLite
consensus disorder prediction
149
173
-
-
Gso7g0315
251
MobiDBLite
consensus disorder prediction
144
191
-
-
Gso7g0315
251
ProSiteProfiles
Zinc finger PHD-type profile.
195
247
IPR019787
-
Gso7g0315
251
PANTHER
CPG BINDING PROTEIN
5
251
IPR045104
GO:0006355|GO:0042393
Gso7g0315
251
Gene3D
Zinc/RING finger domain, C3HC4 (zinc finger)
188
246
IPR013083
-
Gso7g0315
251
PANTHER
ALFIN-LIKE TRANSCRIPTION FACTOR
5
251
-
-
Gso7g0315
251
Pfam
Alfin
10
138
IPR021998
GO:0006355|GO:0042393
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Gso7g0315
Gso-Chr7
2938424
2942273
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Gso7g0315
6
250
Alfin-like Transcription Factor Family
AT3G42790
76.423
1.79e-124
352
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
Alfin-like
Gso7g0315
Alfin
3e-69
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Gso7g0315
-
-
gmx:100794662
469.159
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Gso17g0431
17
3916809
3920756
Gso7g0315
7
2938424
2942273
ECH
Gso7g0315
7
2938424
2942273
Gso7g0315
7
2938424
2942273
ECH
Gso7g0315
7
2938424
2942273
Gso16g0036
16
385195
389237
GST
Gso15g0242
15
2199107
2204116
Gso7g0315
7
2938424
2942273
PCT
Gso11g3567
11
51402655
51406270
Gso7g0315
7
2938424
2942273
PCT
Gso7g0315
7
2938424
2942273
Gso15g0242
15
2199107
2204116
PCT
Gso7g0315
7
2938424
2942273
Gso11g3567
11
51402655
51406270
PCT
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