Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0310 ATGTCCCTCATACAATCTTCATCACTACCGCATGCAGTCGGAGGAGGCTCCATCGCCATCGCTGTCAATGGTGGCCGCCACAGCCACTGTGCCATCAAATGGGCGGTGGAGCACCTCCTTAAGAAGAACTCCTCTTGCATCCTTATTCATGTTCAGACCAAGACCATGCATCCCCATGATGTTGATGACGTGCCTAAAGATGGTCGTCCACCAACTAAAGAAGAATTGCACCAATTTTTTCTTCCCTTTCGAGGATTTTGTGCCAGAAAAGGGATCACAACAAAGGAATTGGTCTTACATGACCTTGATGTTCCAAGTGCACTTACTAATTACGTTGTTGTAAATTGTGTTAGCACCGTTGTCGTTGGTGCTGCTGCTTCCCCCTGGAATACTCTTACAAGAATATTTAATAAAGATGATGTGGCAACTACTTTAGCAAGGTCTTTGCCAGATACTTGCACTTTATATGTTATATCAAAAGGAAAAGTACAACATATCCGACCAACAGGTCATCATTCTCAACATATTAAAGTCACACCAACTAGATCCATAAGAGACACGGTCACTCTCTTGCAAAATACTCCATTAGTTCATCCAAATAAGAATCTTGTTGATGCCCCTACAGATTCTGAAGATACACACAGGAAACCAATCAAAGATGCAAATATTGGGCGAGAGTCCAGCAAACTTTGGGAATCTTTACGAGAAATAAAAGATTTCATGCTAATTGAAGATACCAATTCACCAAGAGGTCCAGCAGAATACAACTTATCACAAAATTCATCAGCTAGAAGTTCTCCTGGAAACAGTGACAGCACAGGGCAACATCTTGGTCCTTCTTTGCTTGACAAGTCACACGGAAACCATGAAGTTGTAAACTCAGACAAGCCTAAGAACATCGCTTCTTCAAAAAGCCCAGTAAACTTAGACATAGAAATGAAGAAACTGAAACTCGAATTGAAAAAAACAACAGAGAAATATGGTATGGCTTGCAAACAAGCTGTTTTAGCAAAACAGAAGGCAACAGAGCTTGAAAAGTGTAGGCAAGAAAAGGAACGCGATTTAGAGGAAGCTAAGCTTGCTGAAGATACTGCATTGGCTTTGGTAGAGGTAGAGAGGCAAAAAACTAAAGTAGCTATGGAATCAGTAGAAATGTCTCAACGCTTGGCAGAGCTGGAAACCCAAAAGAGAAAGGATGCCGAATTAAAAGCCAAGCATGAGAAAGAAGAGAGGAACAAAGCATTGCATGAAGTTGTATGTAATAGTATTCCATATAGAAGATACAAATTTGAAGAAATTGAAGCAGCAACAAATAAATTCGACAATACTTTGAAAATTGGTGAAGGTGGATATGGACCTGTTTTTAGAGGAGTCATTGATCATACTGTTGTTGCCATTAAGGCTGTGAGACCAGACATAGCCCATGGAGAGAGGCAATTTCAACAAGAGGTTATTGTTTTGAGCACCATAAGACATCCAAGCATGGTGCTCCTCCTAGGAGCATGCCCAGAATATGGATGCCTTGTGTACGAGTACATGGAAAATGGAAGCTTAGAAGATCGTCTATTCATGAAAGACAACACTCCACCAATTCCTTGGAAAACACGTTTCAAAATTGCATTAGAGATTGCCACCGGCCTTCTTTTCCTTCACCAAACAAAGCCTGAACCTCTTGTGCACCGCGACTTGAAGCCTGCAAACATCCTCTTAGACAAGAACTATGTGAGCAAAATCAGTGACGTGGGTTTGGCACGACTTGTTCCCCCTTCTGTAGCCGACAAAACTACACAATATCGCTTGACAAATGCAGCTGGAACATTTTGTTACATTGACCCTGAGTATCAACAAACGGGGTTGTTGGGTGTGAAATCAGACGTATATTCATTAGGTGTCGTGCTGCTACAAATTATTACAGGAAAAGCGCCAATGGGTTTGTCACACTTGGTTGAGAAGGCTATTAAAAATCACACTTTCAGTGAGGTGCTTGATCCAAGTGTCTCAGATTGGCCTGTGGAAGAAGCTTTGTCTTTGGCTAAGTTGGCCTTGAAGTGTTGTGAGTTGAGAAAACGTGATAGACCAAATCTTGGTACTGTTGTTTTGCCTGAGCTGAATAGAATATCAAGGATATGGGACTGTGATGACACGCATTATCCTAGAAATTGTTATATGATTCAAGACCATCTGGATCCTAATTAA 2196 0.4135 MSLIQSSSLPHAVGGGSIAIAVNGGRHSHCAIKWAVEHLLKKNSSCILIHVQTKTMHPHDVDDVPKDGRPPTKEELHQFFLPFRGFCARKGITTKELVLHDLDVPSALTNYVVVNCVSTVVVGAAASPWNTLTRIFNKDDVATTLARSLPDTCTLYVISKGKVQHIRPTGHHSQHIKVTPTRSIRDTVTLLQNTPLVHPNKNLVDAPTDSEDTHRKPIKDANIGRESSKLWESLREIKDFMLIEDTNSPRGPAEYNLSQNSSARSSPGNSDSTGQHLGPSLLDKSHGNHEVVNSDKPKNIASSKSPVNLDIEMKKLKLELKKTTEKYGMACKQAVLAKQKATELEKCRQEKERDLEEAKLAEDTALALVEVERQKTKVAMESVEMSQRLAELETQKRKDAELKAKHEKEERNKALHEVVCNSIPYRRYKFEEIEAATNKFDNTLKIGEGGYGPVFRGVIDHTVVAIKAVRPDIAHGERQFQQEVIVLSTIRHPSMVLLLGACPEYGCLVYEYMENGSLEDRLFMKDNTPPIPWKTRFKIALEIATGLLFLHQTKPEPLVHRDLKPANILLDKNYVSKISDVGLARLVPPSVADKTTQYRLTNAAGTFCYIDPEYQQTGLLGVKSDVYSLGVVLLQIITGKAPMGLSHLVEKAIKNHTFSEVLDPSVSDWPVEEALSLAKLALKCCELRKRDRPNLGTVVLPELNRISRIWDCDDTHYPRNCYMIQDHLDPN* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0310 731 CDD STK_N 17 161 - -
Gso7g0310 731 ProSitePatterns Serine/Threonine protein kinases active-site signature. 558 570 IPR008271 GO:0004672|GO:0006468
Gso7g0310 731 MobiDBLite consensus disorder prediction 251 279 - -
Gso7g0310 731 ProSiteProfiles Protein kinase domain profile. 440 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0310 731 Coils Coil 389 417 - -
Gso7g0310 731 MobiDBLite consensus disorder prediction 245 306 - -
Gso7g0310 731 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 17 125 - -
Gso7g0310 731 Gene3D Phosphorylase Kinase; domain 1 419 512 - -
Gso7g0310 731 Coils Coil 337 364 - -
Gso7g0310 731 MobiDBLite consensus disorder prediction 198 221 - -
Gso7g0310 731 Gene3D Transferase(Phosphotransferase) domain 1 513 715 - -
Gso7g0310 731 SUPERFAMILY Protein kinase-like (PK-like) 417 699 IPR011009 -
Gso7g0310 731 Gene3D HUPs 16 154 IPR014729 -
Gso7g0310 731 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 17 709 - -
Gso7g0310 731 MobiDBLite consensus disorder prediction 205 221 - -
Gso7g0310 731 SMART serkin_6 440 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0310 731 PANTHER OS02G0152300 PROTEIN 17 709 - -
Gso7g0310 731 Pfam Protein kinase domain 444 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0310 Gso-Chr7 2843559 2849205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0310 19 706 Receptor kinase-like Gene Family AT1G17540 47.084 0.0 612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gso7g0310 PK_Tyr_Ser-Thr 3.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0310 - - gmx:100799611 1445.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0310 7 2843559 2849205 Gso7g0310 7 2843559 2849205 ECH
Gso7g0310 7 2843559 2849205 Gso15g0237 15 2167062 2171685 PCT
Gso7g0310 7 2843559 2849205 Gso11g3569 11 51422953 51427460 PCT