Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0299 ATGGCCAAAGAAGGTCTTGGACTTGAAATCACCGAGCTAAGGTTGGGTCTACCCGATGCGGAGCATGTAACTGTGGTCAATAAGAATGAGAAGAAGAGGGCCTTCTCGCAAATTGATGATGAAAATAGCTCCTCCGGCGGCGACCGGAAAATCAAGACCAATAAGAGTCAAGTGGTGGGGTGGCCTCCGGTGTGCTCTTACCGGAAGAAGAACAGCATGAACGAAGGTTCAAAGATGTACGTGAAGGTTAGCATGGACGGTGCTCCTTTCTTGCGCAAAATTGATTTGGGTCTCCATAAGGGGTACTCAGATTTAGCCTTGGCTTTGGACAAGCTCTTTGGTTCCTATGGAATGGTGGAGGCCTTGAAGAATGCGGACAATTCTGAACACGTTCCCATTTATGAGGACAAAGATGGTGACTGGATGCTTGTTGGAGATGTCCCTTGGGAAATGTTTATGGAGTCATGCAAGAGGCTGAGGATTATGAAGAGGTCAGATGCCAAGGGCTTCGGTTTGCAACCAAAAGGATCTCTGAAGGGATTCATAGAAAGCGCGGCAAAGTGA 564 0.4787 MAKEGLGLEITELRLGLPDAEHVTVVNKNEKKRAFSQIDDENSSSGGDRKIKTNKSQVVGWPPVCSYRKKNSMNEGSKMYVKVSMDGAPFLRKIDLGLHKGYSDLALALDKLFGSYGMVEALKNADNSEHVPIYEDKDGDWMLVGDVPWEMFMESCKRLRIMKRSDAKGFGLQPKGSLKGFIESAAK* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0299 187 PANTHER AUXIN-RESPONSIVE PROTEIN IAA6 4 170 - -
Gso7g0299 187 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 170 IPR003311 GO:0005634|GO:0006355
Gso7g0299 187 Pfam AUX/IAA family 36 170 IPR033389 -
Gso7g0299 187 Gene3D - 73 175 - -
Gso7g0299 187 ProSiteProfiles PB1 domain profile. 78 166 IPR000270 GO:0005515
Gso7g0299 187 SUPERFAMILY CAD & PB1 domains 70 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0299 Gso-Chr7 2707472 2711276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0299 70 168 B3 DNA Binding Superfamily AT4G23980 34.343 3.37e-10 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Gso7g0299 AUX_IAA 3.4e-44 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0299 K14484 - gmx:100791342 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0299 7 2707472 2711276 Gso7g0299 7 2707472 2711276 ECH