Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0257 ATGGCTTTTTGGTTTTGTTGCGGAAAAGTTTCCACTCGAAGACGAGGGAAAGAACAACCTAAATGGCGGGTGTTTTCTTTGAAGGAATTACACTCTGCCACAAATAATTTCAACTATGATAACAAGCTTGGAGAAGGTAGCTTCGGCAGTGTGTACTGGGGCCAACTTTGGGATGGATCACAAATTGCAGTGAAAAGATTGAAAGTTTGGAGCAACAGAGCAGAGACTGAATTTACTGTTGAACTTGAAATATTGGCAAGAATACGACACAAGAATCTTCTCAGTCTTCGTGGCTACTGTGCTGAAGGACAGGAACGGTTAATTGTATATGAATATATGCAAAATTTGAGCCTCCACTCTCATCTTCATGGACATCACTCATTCGAATGCCTTCTTGATTGGAATCGGCGGATGAACATTGCAATTGGTTCTGCTGAAGGAATTGTGTATCTTCATCACCAAGCAACACCGCATATCATCCACAGAGATATTAAAGCAAGCAACGTGTTGCTGGATTCTGATTTCCGTGCCCGGGTTGCTGATTTCGGGTTTGCTAAGTTGATGCCTGACGGGGCAACGCATATGACTACAAAAGTAAAGGGTACCCTGGGCTACCTTGCACCAGAATATGCTATGTTAGGCAAAGCAAATGAGAGTTGTGATGTCTACAGTTTTGGCATTCTCCTTCTGGAACTCACCAGTGGCAAGAGACCAATTGAAAAGCTTAATTCCACAGTGAGGCGATCTATAGTTGATTGGGCATTGCATTTGGTTTGTGAGAAGAAATTTAGTGAAATTGCTGATCCAAGACTAAATGGCAACTATGTGGAGGGAGAGCTTAAAAGAGTTGTTTTAGTTGCACTTATGTGTGCTCAGGATCTACCTGAGAAGAGACCCACCATACTTGATGTGATAGAGCTACTGAAGGGAGAATCTAAAGATAAATTTTATCATATAGAGAACAGTGAAATGTTCAGAAGCCTTCTAGCTGTAGAAAGCAATGATGAGACATCAGTGGCTGAAGACAGTTTAGACTATATATCAGAAGAAAAAGAATTACAACGTCCCTTGAAAGGGAATAATTAA 1086 0.4116 MAFWFCCGKVSTRRRGKEQPKWRVFSLKELHSATNNFNYDNKLGEGSFGSVYWGQLWDGSQIAVKRLKVWSNRAETEFTVELEILARIRHKNLLSLRGYCAEGQERLIVYEYMQNLSLHSHLHGHHSFECLLDWNRRMNIAIGSAEGIVYLHHQATPHIIHRDIKASNVLLDSDFRARVADFGFAKLMPDGATHMTTKVKGTLGYLAPEYAMLGKANESCDVYSFGILLLELTSGKRPIEKLNSTVRRSIVDWALHLVCEKKFSEIADPRLNGNYVEGELKRVVLVALMCAQDLPEKRPTILDVIELLKGESKDKFYHIENSEMFRSLLAVESNDETSVAEDSLDYISEEKELQRPLKGNN* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0257 361 ProSiteProfiles Protein kinase domain profile. 37 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0257 361 ProSitePatterns Protein kinases ATP-binding region signature. 43 65 IPR017441 GO:0005524
Gso7g0257 361 SUPERFAMILY Protein kinase-like (PK-like) 18 308 IPR011009 -
Gso7g0257 361 Gene3D Transferase(Phosphotransferase) domain 1 113 326 - -
Gso7g0257 361 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Gso7g0257 361 PANTHER BNAA05G14800D PROTEIN 4 355 - -
Gso7g0257 361 Pfam Protein kinase domain 38 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0257 361 Gene3D Phosphorylase Kinase; domain 1 8 112 - -
Gso7g0257 361 SMART serkin_6 37 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g0257 361 PANTHER OS01G0750732 PROTEIN 4 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0257 Gso-Chr7 2378480 2382063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0257 24 304 Trihelix Transcription Factor Family AT1G68690 47.719 1.55e-88 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Gso7g0257 Pkinase 5.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0257 - - gmx:100814204 725.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0257 7 2378480 2382063 Gso7g0257 7 2378480 2382063 ECH