Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0238 ATGGAGGAGTCAGGTGAAAATTGGCCTTCCGATAATTCTTATCTGGATGAGGTCAACGATGAATTTGGTAGTGAAGATGAAGAGGGAGGTTCATTTTCTGGAATGGGCGAGACCGACAGAAAGAAGAGAAAGCGAGAACTCGCAGAGAGGTTCCTTGCACTTTCAGCCACCATACCTGGCTTCACCAAGACGGACAAGACTTCAATCCTGGCCAATGCTAGTAGCTATGTGAAACAACTTCAGCAACGTGTGAGGGAGCTAGAGCAAGAAGTTCAATCCAACGTTTCTAGCAATGAAGGTGCCACCAGCTCTTGCGAAGTGAACTCATCCAATGATTATTACTCTGGTGGTGGACCAAATGAAATTCTTCCCGAGGTCAAAGTAAGAGTGTTACAGAAGGACGTTCTCATCATAATCCACTGTGAGAAACAGAAGGGCATCATGCTCAAAATACTTTCCCAGCTTGAAAATGTTAATCTCTCTGTAGTCAACAGTAGCGTCTTGCGATTTGGGAAAATCACTCTCGACATCACCATTATTGCTAAGATGGGTGAGGGTTACAAGATGACGGTGGATGAACTAGTGAAGACCCTGAGAGTAGCGATATCTTGA 612 0.4477 MEESGENWPSDNSYLDEVNDEFGSEDEEGGSFSGMGETDRKKRKRELAERFLALSATIPGFTKTDKTSILANASSYVKQLQQRVRELEQEVQSNVSSNEGATSSCEVNSSNDYYSGGGPNEILPEVKVRVLQKDVLIIIHCEKQKGIMLKILSQLENVNLSVVNSSVLRFGKITLDITIIAKMGEGYKMTVDELVKTLRVAIS* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0238 203 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 31 80 IPR011598 GO:0046983
Gso7g0238 203 PANTHER PROTEIN, PUTATIVE-RELATED 38 202 - -
Gso7g0238 203 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 41 95 IPR036638 GO:0046983
Gso7g0238 203 MobiDBLite consensus disorder prediction 1 41 - -
Gso7g0238 203 Coils Coil 70 97 - -
Gso7g0238 203 PANTHER BHLH TRANSCRIPTION FACTOR 38 202 - -
Gso7g0238 203 Gene3D - 37 101 IPR036638 GO:0046983
Gso7g0238 203 MobiDBLite consensus disorder prediction 90 110 - -
Gso7g0238 203 SMART finulus 38 86 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0238 Gso-Chr7 2184111 2189059 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0238 41 203 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 42.697 8.76e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0238 - - gmx:100804953 359.377