Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0236 ATGCTCTCATCACTTCCTGATATGATGGAGGACTCATGGGAAAACTGGCTCTCTCATCTGGGAATGAATGATGATTTTAGCTGCACCAACGCTGTATCCTCTGAAGAGATGGTTAGGTTGAACAATGATAGCTCAAATGTTGTAGCAGCGATTGGACCAAAAGTGGAATACACTGACTCCTATTTGAAGAGCAGTGAAGAGAAATTAGGAAGTTGTTATTGGCGTAAAAGGGGTGTGGAAAACCATGAGTTGGAGGCAAAGGCAAGGGATAATGAGAGAGGAACAAAAAGGGCAAGAACCTCTTCTGAGACACAATATCATGTGATGTCAGAGAGAAAAAGGAGACAGGATATAGCAGAGAAATTCATAGCACTCTCAGCTACTATACCTGGCTTGAAGAAGGTAGACAAGGCTACGGTGCTTCGGGAAGCCCTTAACTACATGCGACAACTTCAACAGCGTATAGCAGTGCTGGAAAAAGGGAGCAATAATAAAAGTATAAAGTCATTGATCATCACGAAATCACGTCTTTGTTCTGCTTCATGTGAAACAAACTCTAATGAAGTGCTCCCTCAAGTTGAAGCAAGAGGTTTAGAGAAGGAAGTACTCATTAGAATCTATTGTGAGAAACGAAAGGACATCATGCTCAAGCTTTTGGCCCTGCTAAAAGATGTTCATCTATCAATAGCCAGTAGCAGCATATTGCAATTTGGAAACTCTATTCTCAACATTATCATAATTGCTCAGATGAGTGAGAAATACAACTTGACGGTGAACGATTTGGTTAAGACCTTAAAGCAGATCTTTTGA 810 0.4086 MLSSLPDMMEDSWENWLSHLGMNDDFSCTNAVSSEEMVRLNNDSSNVVAAIGPKVEYTDSYLKSSEEKLGSCYWRKRGVENHELEAKARDNERGTKRARTSSETQYHVMSERKRRQDIAEKFIALSATIPGLKKVDKATVLREALNYMRQLQQRIAVLEKGSNNKSIKSLIITKSRLCSASCETNSNEVLPQVEARGLEKEVLIRIYCEKRKDIMLKLLALLKDVHLSIASSSILQFGNSILNIIIIAQMSEKYNLTVNDLVKTLKQIF* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0236 269 PANTHER BHLH TRANSCRIPTION FACTOR 14 269 - -
Gso7g0236 269 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 102 151 IPR011598 GO:0046983
Gso7g0236 269 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 104 162 IPR036638 GO:0046983
Gso7g0236 269 Gene3D - 97 164 IPR036638 GO:0046983
Gso7g0236 269 SMART finulus 108 157 IPR011598 GO:0046983
Gso7g0236 269 Pfam Helix-loop-helix DNA-binding domain 107 152 IPR011598 GO:0046983
Gso7g0236 269 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 14 269 - -
Gso7g0236 269 Coils Coil 141 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0236 Gso-Chr7 2169457 2173231 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0236 6 266 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 33.455 4.38e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gso7g0236 HLH 1.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0236 - - gmx:100778916 509.99