Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0235 ATGGAGGAGTCATGGGAAAATTGGCATCTTCATATGGAAACCGATTGCGAGAACGATTTCTTAGGCAAGTGTCACGGCACTGACGATGACGAGTTCTTCAGAGACATCCTTCAGCAACCACCACCTGCGGCTTTCTCTTCCGAAAGCGAAAGCGATCACTCCTTCCTCGCTGTCCAAAACACTTCTAGCTTCCCCAACGACGGTGCCGTTTTGTCTCCTAGGAATTACCTCGTCAAAAGCAGCAGCTCCAACTCCTTGGTCTCTCAAAACGCTTCCAAACGACCTCGTCGTTTGTCCTCTCCCAGGACTTACATTCTGTCCTTCGACAACTCAACCATGGTTCCGGCCACACCCGAAACCCGCCCCCGCTCCTCCAATAATTCCCCTCTGCCTGCCAAACGGGCCCTGGAAAGCCCAGGCCCAGTAGCCCGAAGGCCCAACCAAGGAGCTAAGAAGATAAGAACCTCTTCTCAGACCATCGATCACATAATGGCCGAGAGACGACGGAGGCAGGAACTCACGGAGAGGTTCATAGCACTCTCAGCCACGATTCCCGGCTTGAACAAGACGGACAAGGCTTCTGTACTTCGAGCAGCAATTGATTACGTGAAACAACTTCAAGAAAGGGTACAGGAACTGGAGAAACAAGACAAAAAAAGGAGTACAGAGTCAGTAATATTCATCAAGAAACCCGACCCAAATGGAAACGATGAAGACACCACCTCCACTGAAACGAACTGTAGCATCCTTCCTGAGATGGAAGCAAGGGTGATGGGGAAGGAGGTGCTCATTGAGATCCACTGTGAGAAAGAAAATGGTGTTGAGCTAAAAATATTGGACCACCTTGAAAATCTTCATCTCAGTGTTACCGGAAGCAGCGTCTTGCCATTTGGAAATTCTGCTCTCTGCATTACCATCACAACTCAGATGGGTGACGGGTACCAAATGACTGTGAATGATCTAGTGAAAAACCTTAGACAATTGTTCTCAAAATCACATGTGCTAAGCGACAGCGATCCGTACTAG 1026 0.4893 MEESWENWHLHMETDCENDFLGKCHGTDDDEFFRDILQQPPPAAFSSESESDHSFLAVQNTSSFPNDGAVLSPRNYLVKSSSSNSLVSQNASKRPRRLSSPRTYILSFDNSTMVPATPETRPRSSNNSPLPAKRALESPGPVARRPNQGAKKIRTSSQTIDHIMAERRRRQELTERFIALSATIPGLNKTDKASVLRAAIDYVKQLQERVQELEKQDKKRSTESVIFIKKPDPNGNDEDTTSTETNCSILPEMEARVMGKEVLIEIHCEKENGVELKILDHLENLHLSVTGSSVLPFGNSALCITITTQMGDGYQMTVNDLVKNLRQLFSKSHVLSDSDPY* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0235 341 MobiDBLite consensus disorder prediction 214 237 - -
Gso7g0235 341 MobiDBLite consensus disorder prediction 214 243 - -
Gso7g0235 341 SMART finulus 163 212 IPR011598 GO:0046983
Gso7g0235 341 Pfam Helix-loop-helix DNA-binding domain 162 207 IPR011598 GO:0046983
Gso7g0235 341 MobiDBLite consensus disorder prediction 81 132 - -
Gso7g0235 341 Gene3D - 155 226 IPR036638 GO:0046983
Gso7g0235 341 PANTHER BHLH TRANSCRIPTION FACTOR 1 335 - -
Gso7g0235 341 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 156 218 IPR036638 GO:0046983
Gso7g0235 341 MobiDBLite consensus disorder prediction 81 157 - -
Gso7g0235 341 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 157 206 IPR011598 GO:0046983
Gso7g0235 341 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 1 335 - -
Gso7g0235 341 Coils Coil 196 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0235 Gso-Chr7 2156184 2159277 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0235 97 330 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 42.213 1.82e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gso7g0235 HLH 7.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0235 - - gmx:100778376 660.988