Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0234 ATGGGGGAGCCATGCCAACAATATTGGTTTTCGGATATGGAAATACAAGATTTTGATTTCTTTAACCAAAGCCAGAACCACAAGATTGGATCACTCGATCGTGATGAGGATCGGATCTTTCGAGAGATCATGATGCATCAACCAGTTTTCTCTTCTGACAGCGATACTCACTCTCCCAAAATTCTAAGCAAATCAATCCACGGTGGTGATAGTGGTTATAATACTTACACAGCCCTTGCCAACAACAAGAGTAGCAATAGCAACCTAGTGATGAAGAGCAACAGCTCCAACTTCATCTTCTCATCACAACATGCACCACCAGAGAAACCTTCCACAGCCACAGTCGCTTCCCCAACCGCATACATTCTTTCATTCGGCGACTCCACCCTAGTGGCAGCTACACGCCAAAACTACGGTGGAAAACAGCCCTACCACGAGGAAGTGGTAGTAGGGAGTGGTGGCGTATGTCTTCCCTCAAAAGGGGTCTCAGAAAAACATGATGTTGAACCTACTACGGCCAACCAAACAACAAAGAGAAGTAGAAGCTCTGCGGAGACACTAGACCATATAATGACAGAGAGAAAAAGAAGACGGGAACTGACTGAGAGATTCATTGCACTTTCAGCCACCATACCTGGCTTAAAGAAGATTGACAAGGCCACTATACTCAGTGAAGCAATCACTCATGTGAAAAGACTTAAAGAACGTGTAAGGGAGCTCGAAGAACAGTGTAAGAGGACAAAGGTAGAGTCAGTGTCATTCGTTCATCAGAGACCCCACATTACAACTGATAAAGGCACCACCTCTGGTGCAATGAACTCTGATGAATGCTGTAGAACCAATGAAGCACTCCCTACGGTGGAAGCAAGAGTGTTTAAAAAAGATGTACTCCTCCGGATTCACTGCAAGATACAAAGTGGCATTTTGATCAAAATTTTGGATCATCTTAATAGTCTTGATCTCTCCACAATCAGCAACAGTGTAATGCCATTTGGAAGTTCAACTCTTGATATCAGCATTATTGCTCAGATGGGGGACAAATTCAAAGTAACAATGAACGATCTAGTGAAAAATCTGAGACTGGCTCTCTTGCAGTCATCTGAAGTACAATAA 1113 0.4349 MGEPCQQYWFSDMEIQDFDFFNQSQNHKIGSLDRDEDRIFREIMMHQPVFSSDSDTHSPKILSKSIHGGDSGYNTYTALANNKSSNSNLVMKSNSSNFIFSSQHAPPEKPSTATVASPTAYILSFGDSTLVAATRQNYGGKQPYHEEVVVGSGGVCLPSKGVSEKHDVEPTTANQTTKRSRSSAETLDHIMTERKRRRELTERFIALSATIPGLKKIDKATILSEAITHVKRLKERVRELEEQCKRTKVESVSFVHQRPHITTDKGTTSGAMNSDECCRTNEALPTVEARVFKKDVLLRIHCKIQSGILIKILDHLNSLDLSTISNSVMPFGSSTLDISIIAQMGDKFKVTMNDLVKNLRLALLQSSEVQ* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0234 370 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 188 258 IPR036638 GO:0046983
Gso7g0234 370 Coils Coil 223 250 - -
Gso7g0234 370 MobiDBLite consensus disorder prediction 160 186 - -
Gso7g0234 370 PANTHER BHLH TRANSCRIPTION FACTOR 7 365 - -
Gso7g0234 370 Pfam Helix-loop-helix DNA-binding domain 189 233 IPR011598 GO:0046983
Gso7g0234 370 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 184 233 IPR011598 GO:0046983
Gso7g0234 370 PANTHER TRANSCRIPTION FACTOR NAI1 7 365 - -
Gso7g0234 370 SMART finulus 190 239 IPR011598 GO:0046983
Gso7g0234 370 Gene3D - 172 250 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0234 Gso-Chr7 2144542 2147250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0234 81 363 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 36.644 2.51e-43 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Gso7g0234 HLH 2.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0234 - - gmx:100777846 706.827