Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0233 ATGAACGGCGAACTCTTCTTACACGCGCCCACCACCACCACCACTAACTTTTTGCTTCCAAAAAAATCCCAAACGGCGTCGTCGGAGACACTGGACCCATCACAGAAGCTACGACGCTACGAAACGGCGCTGGAAGGAATCGCCGCGGTCGTGGGAGAACACGTCCTCTTCGGAACCACGTTGTCGCATGTTTCTGAGACTCCGAAGAAGACAAATGGCGTGTCGTCGTCGTTGAGCAAGAGCTACAGAGGAGTAAGGAAGCGACCGTGGGGGAGGTGGTCAGCGGAGATACGCGACCGCATCGGGCGGTGCCGCCACTGGCTGGGGACTTTCGACACGGCGGAGGAGGCGGCGCGTGCGTACGACGCGGCGGCGAGGCGCATGAGAGGCGCGAAGGCGAGGACCAACTTCAAGATACCCTCGGTGTTGCCACTTTCTCCGGAAGGGGTTCATGGTAGTGCCGTGAAGCCGAAAACCGCGCGAAGCAACGCTAGGAAGTGTTCTTCCGTGGAACAATTGTTCAGTGGGGTGCCTCAACTTCGAAAAGATGATGGTATCGGCGAGAATGGGAATGTGGAGGTCGATTTGAAGCTGGGTGTGAACTTTGGTGTTACGAGCTCTAGAATGGTGCTTTAG 636 0.5708 MNGELFLHAPTTTTTNFLLPKKSQTASSETLDPSQKLRRYETALEGIAAVVGEHVLFGTTLSHVSETPKKTNGVSSSLSKSYRGVRKRPWGRWSAEIRDRIGRCRHWLGTFDTAEEAARAYDAAARRMRGAKARTNFKIPSVLPLSPEGVHGSAVKPKTARSNARKCSSVEQLFSGVPQLRKDDGIGENGNVEVDLKLGVNFGVTSSRMVL* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0233 211 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF084 37 196 - -
Gso7g0233 211 SUPERFAMILY DNA-binding domain 81 138 IPR016177 GO:0003677
Gso7g0233 211 Gene3D AP2/ERF domain 80 139 IPR036955 GO:0003700|GO:0006355
Gso7g0233 211 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 37 196 - -
Gso7g0233 211 SMART rav1_2 81 144 IPR001471 GO:0003700|GO:0006355
Gso7g0233 211 CDD AP2 80 139 IPR001471 GO:0003700|GO:0006355
Gso7g0233 211 Coils Coil 114 134 - -
Gso7g0233 211 Pfam AP2 domain 81 130 IPR001471 GO:0003700|GO:0006355
Gso7g0233 211 PRINTS Ethylene responsive element binding protein signature 82 93 IPR001471 GO:0003700|GO:0006355
Gso7g0233 211 PRINTS Ethylene responsive element binding protein signature 104 120 IPR001471 GO:0003700|GO:0006355
Gso7g0233 211 ProSiteProfiles AP2/ERF domain profile. 81 138 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0233 Gso-Chr7 2132012 2132921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0233 45 144 AP2-EREBP Transcription Factor Family AT1G80580 66.667 8.48e-29 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Gso7g0233 AP2 1.5e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0233 - - gmx:102660200 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0233 7 2132012 2132921 Gso7g0233 7 2132012 2132921 ECH