Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0232 CATGTTGGAGCAGAGTTTCTGGGCACCTTCCTTCTCATGCTTGCGGCAATAAGCGCTGCAATTGAAAAAGAAAAGTCACAAGGACAAGAAACTATGATGGGATGTGCAGAAATTACTGGAGTTGTTATGATGATCATCATATACTCCATAGGCAACATCTCCGGGGCTCATCTCAACCCCGCTGTAACCATCTCCTTTGCTGCAATAAAGCACATCCCGTGGAAGAATGTGCCTTTGTATATTGGTGCACAAGTTTTGGCATCAGTGAGTGCTGCATTTGCTCTGAAGTTAATTTTTCATCCATTCATGAGCGGTGGAGTGACGGTCCCTTCAGTGGGATATGGGAAAGCTTTCGCTGCAGAGTTCAGTGTCAGCTTTACTCTTATGTTCGTTGTCACTGCAGTGGCCAACGGCACAAGAGCTGTGCGATTGTTCGCGGGAATCGTGGTGGGAGCCACTGTCATGATCAACATACACATGGCGGGGGCAGCAACTGGGAGTTCAATGAACCCGGCTAGAACACTGGGTCCAGCAATTGCTGCACACAACTACAAGGGCATATGGATCTATCTCACAGCTCCAATACTTGGATCTCTATGTGGGGCAGGTGCCTACACTGTGCTCAAGCTGCCTGATCGCAACACTACTATGCAGGAAGAGTGA 663 0.4842 HVGAEFLGTFLLMLAAISAAIEKEKSQGQETMMGCAEITGVVMMIIIYSIGNISGAHLNPAVTISFAAIKHIPWKNVPLYIGAQVLASVSAAFALKLIFHPFMSGGVTVPSVGYGKAFAAEFSVSFTLMFVVTAVANGTRAVRLFAGIVVGATVMINIHMAGAATGSSMNPARTLGPAIAAHNYKGIWIYLTAPILGSLCGAGAYTVLKLPDRNTTMQEE* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0232 220 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 13 220 - -
Gso7g0232 220 SUPERFAMILY Aquaporin-like 3 216 IPR023271 -
Gso7g0232 220 Gene3D Glycerol uptake facilitator protein. 1 220 IPR023271 -
Gso7g0232 220 PRINTS Major intrinsic protein family signature 39 63 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso7g0232 220 PRINTS Major intrinsic protein family signature 76 95 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso7g0232 220 PRINTS Major intrinsic protein family signature 120 138 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso7g0232 220 PRINTS Major intrinsic protein family signature 151 173 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso7g0232 220 PRINTS Major intrinsic protein family signature 188 208 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso7g0232 220 ProSitePatterns MIP family signature. 57 65 IPR022357 -
Gso7g0232 220 Pfam Major intrinsic protein 4 205 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso7g0232 220 PANTHER AQUAPORIN NIP2-1 13 220 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0232 Gso-Chr7 2120484 2122814 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0232 1 220 Major Intrinsic Protein MIP AT1G80760 65.000 3.30e-100 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0232 K09874 - gmx:100798410 328.946