Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0227 ATGGCAGCAAAGAAGGTGTGTGTAACAGGTGCTGGAGGATTCGTAGCGTCTTGGCTTGTTAAGCTTCTTCTTTCCAAAGGCTACATTGTCCATGGAACTGTGAGAGACCCTGAACCTGCTACTCAGAAATATGAACACTTGCTCAAACTCCACGGAGCTTCTGAAAACCTCACTCTCTTCAAGGCAGATCTCTTGAACTACGAATCTCTTCGCTCAGCAATTTCTGGATGCACTGCAGTTTTCCATCTTGCTTGCCCTGTACCCTCAATCAGTGTTCCCAACCCTCAGGTTGAAATGATTGAGCCTGCTGTGAAAGGAACAACTAATGTACTTGAAGCTAGCCTTGAAGCTAAAGTGCAACGACTTGTCTTTGTATCATCTTTAGCTGCTATTTCCAATAGCCCCAATTTGCCTAAAGATAAAGTGATTGATGAGTCCTATTGGTCTGATAAAGATTACTGCAAAACAACTCAGAACTGGTACTGTTTTTCCAAGACAGAGGCGGAGGAGCAGGCCTTGGACTTTGCCAAAAGAACTGGCCTTGATGTGGTAAGCATTTGCCCTTCCCTTGTTCTCGGGCCAATTTTACAGTCAACCACTGTTAATGCAAGTAGCCTGGCTCTCCTCAAACTTTTAAAAGGTGTCAACTCAATGGAGAATAAGATCCGTTGGATAGTCGATGTACGAGATGTAGCTGATGCAATACTTTTGGCTTATGAGAAGCTTGAGGCAGAAGGGAGATACATATGCCATTCACATACCATCAAGACACGGGATATGCTGGAGAAACTAAAGAGTATATATCCCAACTACAAATACCCTGCGAAGTATACTGAGGTGGATGATTACATAAGTTTCAGCTCAGAGAAACTGCAAAGGTTGGGTTGGAAATACAGGTCACTGGAGGAAACACTCGTTGATTCTGTTGAGAGCTATCGGGAAGCTGGCCATCTGCAATCAGAATAA 966 0.4389 MAAKKVCVTGAGGFVASWLVKLLLSKGYIVHGTVRDPEPATQKYEHLLKLHGASENLTLFKADLLNYESLRSAISGCTAVFHLACPVPSISVPNPQVEMIEPAVKGTTNVLEASLEAKVQRLVFVSSLAAISNSPNLPKDKVIDESYWSDKDYCKTTQNWYCFSKTEAEEQALDFAKRTGLDVVSICPSLVLGPILQSTTVNASSLALLKLLKGVNSMENKIRWIVDVRDVADAILLAYEKLEAEGRYICHSHTIKTRDMLEKLKSIYPNYKYPAKYTEVDDYISFSSEKLQRLGWKYRSLEETLVDSVESYREAGHLQSE* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0227 321 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 4 318 - -
Gso7g0227 321 CDD FR_SDR_e 6 296 - -
Gso7g0227 321 Pfam NAD dependent epimerase/dehydratase family 6 244 IPR001509 -
Gso7g0227 321 Gene3D - 1 321 - -
Gso7g0227 321 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 318 - -
Gso7g0227 321 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 314 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0227 Gso-Chr7 2070451 2073386 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0227 5 315 Monolignol Biosynthesis Gene Families AT2G33590 63.462 3.16e-143 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0227 - - gmx:100784817 637.106