Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0222 ATGTCTGAGGGAAATGCAGGGAAAGGAAAGAGAATCGCCATCATTGGCGTCTCAGCCTTATTGTTGGTGGCTATGGTTGTGGCAATCACAGTTGGGGTCAATCTCAATGAGAATGGTTCCAACAATGATACAGAGGACAACAAGAAAAATCATGTTGTTTCTTCTATAAAAGCCGTCCAAACCCTTTGTCATCCCACAAATTATAAGAAAGAATGCGAGGAAAGCCTTATAGCTGGGGCTGGAAATACCACAGATCCAAAAGAACTTATCAAAATTTTCTTCAACATCACCATTACAAAAATTGGTGATAAACTCAAAGAAACTAATATTTTGCATGAGGTTGAGGAGGAACCCAGAGCCAAGATGGCACTTGAAACATGCAAGCAACTCATGGATCTTTCTATTGGGGAATTAACAAGGTCACTTGATGGAATAGGTGAGTTTAACCTCATAAATGTTGACAAAATCCTCATGAATTTAAAAGTTTGGCTTAGTGGCGCGGTTACATACCAAGATACTTGCTTGGATGGGTTTGAGAACACCACTAGTGATGCTGGCAAAAAGATGAAGGATTTGTTGACGATAGGCATGCATATGAGCAGCAATGCCCTTGCCATTGTAACAGATTTAGCTGACACTGTTAATGATTGGAATATCACAAAATCATTTGGGCGTCGCCTCCTTCAAGATTCTGAGCTTCCGTCATGGGTTGATCAACATAGACTCCTTAATGAAAATGCAAGTCCATTAAAACGCAAGCCTAATGTTACTGTAGCCATAGATGGTAGTGGAGATTTCAAAAGCATCAATGAGGCATTGAAGCAAGTGCCTGAGAAAAACCGAAAGCCATTTGTGATCTACATCAAGGAAGGCGTTTACCAAGAGTATGTTGAAGTTACAAAAAAAATGACCCATGTGGTGTTTATTGGTGAAGGGGGGAAAAAGACACGAATATCTGGTAACAAAAACTTCATAGATGGAACGAACACTTATAGAACTGCCACTGTCGCTATTCAAGGAGATCACTTTGTGGCCATCAATATGGGGTTTGAGAATTCTGCTGGACCTCATAAGCATCAAGCGGTGGCATTGAGAGTCCAAGCAGACAAGTCCATCTTTTACAATTGCTCAATGGATGGGTATCAAGACACACTTTATGCACACACCATGCGTCAATTCTATAGAGATTGCACCATTTCAGGTACCATCGACTTTGTGTTCGGTAATGCACTAGCTGTTTTTCAAAATTGCACTTTCGTGGTCCGAAAGCCAATGGAGAACCAACAATGCATTGTGACTGCACAAGGTAGAAAAGAGAGACAACAACCATCTGGAATAGTAATCCAAGGGGGATCCATTGTGTCTGACCCTGAGTTCTACTCAGTGAGATTTGAGAACAAGGCTTACCTAGCTCGTCCATGGAAGAATTACTCTAGGACTATTATCATGGACACGTACATTGATGATTTGATTGACGCTGATGGGTATTTGCCATGGCAAGGACTAGAGGGTCCTTCTGGTATGGATACTTGCTTCTATGCCGAGTACCACAACATTGGCCCCGGTTCAGACAAATCCAAGCGTGTGAAATGGGCTGGGATTTGGAACCTCAATTCAAAAGCAGCACGTTGGTTCTCACCATCTAAGTTTTTTCATGGAACTGATTGGATTGAGGTTACCGGAATTCCTTGCTTTCCTGGCGTGCCGAAACACCATAGGCACAAAAAGACAATACTTAATTGGCAATAA 1749 0.418 MSEGNAGKGKRIAIIGVSALLLVAMVVAITVGVNLNENGSNNDTEDNKKNHVVSSIKAVQTLCHPTNYKKECEESLIAGAGNTTDPKELIKIFFNITITKIGDKLKETNILHEVEEEPRAKMALETCKQLMDLSIGELTRSLDGIGEFNLINVDKILMNLKVWLSGAVTYQDTCLDGFENTTSDAGKKMKDLLTIGMHMSSNALAIVTDLADTVNDWNITKSFGRRLLQDSELPSWVDQHRLLNENASPLKRKPNVTVAIDGSGDFKSINEALKQVPEKNRKPFVIYIKEGVYQEYVEVTKKMTHVVFIGEGGKKTRISGNKNFIDGTNTYRTATVAIQGDHFVAINMGFENSAGPHKHQAVALRVQADKSIFYNCSMDGYQDTLYAHTMRQFYRDCTISGTIDFVFGNALAVFQNCTFVVRKPMENQQCIVTAQGRKERQQPSGIVIQGGSIVSDPEFYSVRFENKAYLARPWKNYSRTIIMDTYIDDLIDADGYLPWQGLEGPSGMDTCFYAEYHNIGPGSDKSKRVKWAGIWNLNSKAARWFSPSKFFHGTDWIEVTGIPCFPGVPKHHRHKKTILNWQ* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0222 582 SMART PMEI_2 54 206 IPR006501 GO:0004857
Gso7g0222 582 Pfam Pectinesterase 255 553 IPR000070 GO:0030599|GO:0042545
Gso7g0222 582 Gene3D - 253 569 IPR012334 -
Gso7g0222 582 Pfam Plant invertase/pectin methylesterase inhibitor 58 206 IPR006501 GO:0004857
Gso7g0222 582 SUPERFAMILY Pectin lyase-like 253 565 IPR011050 -
Gso7g0222 582 CDD PMEI-like_3 61 211 - -
Gso7g0222 582 ProSitePatterns Pectinesterase signature 1. 280 299 IPR018040 -
Gso7g0222 582 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 211 IPR035513 -
Gso7g0222 582 ProSitePatterns Pectinesterase signature 2. 399 408 IPR033131 -
Gso7g0222 582 PANTHER PECTINESTERASE 10 567 - -
Gso7g0222 582 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 58 210 IPR035513 -
Gso7g0222 582 PANTHER PECTINESTERASE 10 567 - -
Gso7g0222 582 TIGRFAM PME_inhib: pectinesterase inhibitor domain 57 210 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0222 Gso-Chr7 2022411 2025387 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0222 8 568 Carbohydrate Esterase AT3G05610 49.201 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0222 K01051 - gmx:100803527 1173.3