Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0220 ATGATCATCATATTCTCCACAGGAAACATCTCTGAGACTCATCTCAACCCCACTGTCACCATTTCCTTTGCTGCATTAAAGCACTTCCCTGAAAAGAATGTGCCTGTGTATATTGGTGCACAAGTTTTGGCATCAGTGAGTGCTGCATTTGCTCTGAAGGCGCTTTTTCATCCGTACATGAGCGGTGGAGTGACGGTCCCTTCAATGGGATATGGGCAAGCTTTCGCTATAGAGTTCATTGTCAGCTTTATGCTTATGTTCGTTGTCACTGTAGTGGCCACCCGCACAAGAGTTGTGAGTATTTTATTCTACTAA 315 0.4444 MIIIFSTGNISETHLNPTVTISFAALKHFPEKNVPVYIGAQVLASVSAAFALKALFHPYMSGGVTVPSMGYGQAFAIEFIVSFMLMFVVTVVATRTRVVSILFY* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0220 104 Gene3D Glycerol uptake facilitator protein. 1 102 IPR023271 -
Gso7g0220 104 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 101 - -
Gso7g0220 104 Pfam Major intrinsic protein 2 99 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso7g0220 104 PANTHER AQUAPORIN NIP2-1 1 101 IPR034294 -
Gso7g0220 104 ProSitePatterns MIP family signature. 14 22 IPR022357 -
Gso7g0220 104 SUPERFAMILY Aquaporin-like 1 97 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0220 Gso-Chr7 2004819 2005575 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0220 1 102 Major Intrinsic Protein MIP AT1G80760 75.490 1.29e-47 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0220 K09874 - gsj:114418074 199.519