Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0219 ATGGACATTAGTCTCGGAAGAAAGGTTGGAGCAGAGTTTCTGGGCACGTTCCTTCTCATGTCTGCGGCAATAGGCGCTGCAATTGAAAAAGAGAAGTCGCAAGGATCAGTGGTGGGATGTGCAGTAATTAGTGGAGTTACTGTGATGATAATCATATGCTCCATAGGCCACATCTCCGGAGCTCATCTCAACCCCGCTGTCACCATCTCCTTTGCTGTAATAGAGCACATGCCGTGGAAGAATGTGCCTGTGTATATTGGTGCACAAGTTTTGGCATCAGTGAGTGCTGCATTTGCTCTGAAGTTAATTTTTCATCCATTCATGAGCGGTGGAGTGACGGTCCCTTCGGTGGGATATGGGCAAGCTTTCGCTGCAGAGTTCATGGTCAGCTTTACTCTTATGTTCGTTGTCACTGCAGTGGCCGACGGCACAAGAGTTGTGCGAGAGTTCCCGGGAATCATTATGGTGCAGGTGCGATTGTTCGCGGGAATCGTGGTGGGAGCCACTGTCATGATCAACATACTCATGGCGGGGGCAGCAACTGGGAGTTCAATGAACCCGGCTAGAACACTGGGTCCAGCAATTGCTGCACACAACTACAAGGGCATATGGATCTATCTCACAGCTCCAATACTTGGATCTCTATGTGGGGCAGGTGCCTACACTGTGCTCAAGCTGCCTGATCACATCAGGAAGAGTGATCGCAACACTGCAAGAGTGATAGCAAGACTTTACCCAGAATGA 744 0.4973 MDISLGRKVGAEFLGTFLLMSAAIGAAIEKEKSQGSVVGCAVISGVTVMIIICSIGHISGAHLNPAVTISFAVIEHMPWKNVPVYIGAQVLASVSAAFALKLIFHPFMSGGVTVPSVGYGQAFAAEFMVSFTLMFVVTAVADGTRVVREFPGIIMVQVRLFAGIVVGATVMINILMAGAATGSSMNPARTLGPAIAAHNYKGIWIYLTAPILGSLCGAGAYTVLKLPDHIRKSDRNTARVIARLYPE* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0219 247 PRINTS Major intrinsic protein family signature 7 26 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso7g0219 247 PRINTS Major intrinsic protein family signature 44 68 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso7g0219 247 PRINTS Major intrinsic protein family signature 81 100 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso7g0219 247 PRINTS Major intrinsic protein family signature 125 143 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso7g0219 247 PRINTS Major intrinsic protein family signature 167 189 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso7g0219 247 PRINTS Major intrinsic protein family signature 204 224 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso7g0219 247 ProSitePatterns MIP family signature. 62 70 IPR022357 -
Gso7g0219 247 Pfam Major intrinsic protein 6 221 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso7g0219 247 SUPERFAMILY Aquaporin-like 4 229 IPR023271 -
Gso7g0219 247 PANTHER AQUAPORIN NIP2-1 20 236 IPR034294 -
Gso7g0219 247 Gene3D Glycerol uptake facilitator protein. 1 239 IPR023271 -
Gso7g0219 247 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 20 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0219 Gso-Chr7 2002425 2039779 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0219 2 239 Major Intrinsic Protein MIP AT1G80760 62.397 3.88e-99 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0219 K09874 - gmx:100798410 325.865