Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0215 ATGGATCTTCAAAGGCAAGAGTCATGCCCTTCTGAAAATTTGAACATCATCACATTTTCAGATACTGTGCCATGCCAAAATCCTGAACCTTCCATCAACACTCAAACAAAGACGAATCAGACACAAACGGAAGATCAAAAACACCCACATGACTCGGTTCCTCGTGTTTTACTAGATCTAAGTCTCTCCAACAAGGATTCAAGTGATGATGACTCAAAGTCAGAACTCAACCTCCTCAATTGTTTCCATACAAATTTCTCTGAAAACACATCAGAATCCAGTCAGGGAAATGAACTGGATCCTCGAGTCTTCTCATGCAACTACTGCCAAAGAAAGTTTTATAGTTCCCAGGCACTAGGGGGACACCAGAATGCACACAAACGTGAAAGAACTTTGGCAAGAAGAGGATACAAAGCTGGCGTAGCAGATTTTGGACACACATACTCCAACATGCATTTTCTGCCTTCACATGACTTGTACAACAAAGCACTTGGAATTCAGGTTCATTCTATGATTAACAAACCTTCTTATCAAACACCCATTTTTGGGCCGTGCCATTCAATTGGATGGCAGAGGCAACCTTTGGATGCACAACCAGCAATTGGGAACTTTCGCGTGGGGGCAGAAACTGAGTCATCTTTGGCTGATAGTGTTCCAAAGTTAGGCAAGTTTTCCACAAGGTTGGTGACAGAAGGGTTTGGAGGGTACTGCTTTGGTAGCATTACTAATTTGAAGTCTAAACAACAAGAGAAGTTGCAGAAGCTTGACTTGTCCCTTAAGCTCTAA 786 0.4237 MDLQRQESCPSENLNIITFSDTVPCQNPEPSINTQTKTNQTQTEDQKHPHDSVPRVLLDLSLSNKDSSDDDSKSELNLLNCFHTNFSENTSESSQGNELDPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLARRGYKAGVADFGHTYSNMHFLPSHDLYNKALGIQVHSMINKPSYQTPIFGPCHSIGWQRQPLDAQPAIGNFRVGAETESSLADSVPKLGKFSTRLVTEGFGGYCFGSITNLKSKQQEKLQKLDLSLKL* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0215 261 MobiDBLite consensus disorder prediction 22 53 - -
Gso7g0215 261 ProSitePatterns Zinc finger C2H2 type domain signature. 106 126 IPR013087 -
Gso7g0215 261 Gene3D Classic Zinc Finger 82 143 - -
Gso7g0215 261 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 39 261 IPR044246 GO:0009788
Gso7g0215 261 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 39 261 - -
Gso7g0215 261 ProSiteProfiles Zinc finger C2H2 type domain profile. 104 131 IPR013087 -
Gso7g0215 261 SUPERFAMILY beta-beta-alpha zinc fingers 101 131 IPR036236 -
Gso7g0215 261 MobiDBLite consensus disorder prediction 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0215 Gso-Chr7 1958191 1959553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0215 8 261 C2H2 Transcription Factor Family AT5G10970 39.630 6.45e-42 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gso7g0215 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0215 - - gmx:100816861 471.47