Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0212 ATGGACATTAGTCTCGGAAGAAAGGTTGGAGCAGAGTTTCTGGGCACGTTCCTTCTCATGTCTGCGGCAATAGGCGCTGCAATTGAAAAAGAGAAGTCGCAAGGATCAGTGGTGGGATGTGCAGTAATTAGTGGAGTTACTGTGATGATAATCATATGCTCCATAGGCCACATCTCCGGAGCTCATCTCAACCCCGCTGTCACCATCTCCTTTGCTGTAATAGAGCACATGCCGTGGAAGAATGTGCCTGTGTATATTGGTGCACAAGTTTTGGCATCAGTGAGTGCTGCATTTGCTCTGAAGTTAATTTTTCATCCATTCATGAGCGGTGGAGTGACGGTCCCTTCGGTGGGATATGGGCAAGCTTTCGCTGCAGAGTTCATGGTCAGCTTTACTCTTATGTTCGTTGTCACTGCAGTGGCCGACGGCACAAGAGTTGTGCGAGAGTTCCCGGGAATCATTATGGTGCAGGTGCGATTGTTCGCGGGAATCGTGGTGGGAGCCACTGTCATGATCAACATACTCATGGCGGGGGCAGCAACTGGGAGTTCAATGAACCCGGCTAGAACACTGGGTCCAGCAATTGCTGCACACAACTACAAGGGCATATGGATCTATCTCACAGCTCCAATACTTGGATCTCTATGTGGGGCAGGTGCCTACACTGTGCTCAAGCTGCCTGATCGCAACACTACTATGCAGGAAGAGTGA 711 0.5007 MDISLGRKVGAEFLGTFLLMSAAIGAAIEKEKSQGSVVGCAVISGVTVMIIICSIGHISGAHLNPAVTISFAVIEHMPWKNVPVYIGAQVLASVSAAFALKLIFHPFMSGGVTVPSVGYGQAFAAEFMVSFTLMFVVTAVADGTRVVREFPGIIMVQVRLFAGIVVGATVMINILMAGAATGSSMNPARTLGPAIAAHNYKGIWIYLTAPILGSLCGAGAYTVLKLPDRNTTMQEE* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0212 236 PANTHER AQUAPORIN NIP2-1 20 236 IPR034294 -
Gso7g0212 236 SUPERFAMILY Aquaporin-like 4 232 IPR023271 -
Gso7g0212 236 Pfam Major intrinsic protein 6 221 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso7g0212 236 ProSitePatterns MIP family signature. 62 70 IPR022357 -
Gso7g0212 236 PRINTS Major intrinsic protein family signature 7 26 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso7g0212 236 PRINTS Major intrinsic protein family signature 44 68 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso7g0212 236 PRINTS Major intrinsic protein family signature 81 100 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso7g0212 236 PRINTS Major intrinsic protein family signature 125 143 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso7g0212 236 PRINTS Major intrinsic protein family signature 167 189 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso7g0212 236 PRINTS Major intrinsic protein family signature 204 224 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso7g0212 236 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 20 236 - -
Gso7g0212 236 Gene3D Glycerol uptake facilitator protein. 3 236 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0212 Gso-Chr7 1900867 1903973 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0212 2 236 Major Intrinsic Protein MIP AT1G80760 62.447 6.25e-100 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0212 K09874 - gmx:100798410 327.791