Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g0207 ATGTCAGGTGAAGAGGGTGTCATTGCAGTTGAGCCAGCTGCTGCTGCTGCTGCCATCCCAGGCGAGCCAATGGATATCATGACTGCCTTACAACTTGTGCTCAGAAAATCTCTGGCTTATGGTGGTTTGTCGCGTGGCCTTCATGAAGGTGCAAAAGTGATTGAGAAGCATGCTGCACAACTCTGTGTTCTTGCAGAAGACTGTGACCAGCCTGACTATGTTAAACTGGTTAAGGCCCTTTGTGCAGAGCACAATGTTAGCCTGCTGACAGTTCCGAGTGCAAAGACCCTTGGAGAATGGGCTGGTTTGTGCAAGATTGATTCCGAAGGAAAAGCAAGGAAGGTTACTGGTTGCTCCTGTGTGGTTGTGAAGGATTTCGGTGAGGAGCATGAAGCCTATAACGTCGTTCTGCAGCATGTGAAATCTCAATGA 432 0.4884 MSGEEGVIAVEPAAAAAAIPGEPMDIMTALQLVLRKSLAYGGLSRGLHEGAKVIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQHVKSQ* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g0207 143 SUPERFAMILY L30e-like 23 141 IPR029064 -
Gso7g0207 143 PRINTS Ribosomal protein S12E family signature 33 46 IPR000530 GO:0003735|GO:0005840|GO:0006412
Gso7g0207 143 PRINTS Ribosomal protein S12E family signature 47 63 IPR000530 GO:0003735|GO:0005840|GO:0006412
Gso7g0207 143 PRINTS Ribosomal protein S12E family signature 88 109 IPR000530 GO:0003735|GO:0005840|GO:0006412
Gso7g0207 143 PRINTS Ribosomal protein S12E family signature 113 126 IPR000530 GO:0003735|GO:0005840|GO:0006412
Gso7g0207 143 PANTHER 40S RIBOSOMAL PROTEIN S12 1 143 - -
Gso7g0207 143 PANTHER 40S RIBOSOMAL PROTEIN S12 1 143 IPR000530 GO:0003735|GO:0005840|GO:0006412
Gso7g0207 143 Gene3D - 10 143 IPR029064 -
Gso7g0207 143 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 29 122 IPR004038 -
Gso7g0207 143 ProSitePatterns Ribosomal protein S12e signature. 29 47 IPR000530 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g0207 Gso-Chr7 1859802 1861797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g0207 19 143 Cytoplasmic Ribosomal Protein Gene Family AT2G32060 74.400 5.68e-66 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g0207 K02951 - gmx:100786733 261.536